KEGG   Vitis riparia (riverbank grape): 117927338
Entry
117927338         CDS       T07274                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 6B-like isoform X1
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03020  RNA polymerase
vri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117927338
  09124 Replication and repair
   03420 Nucleotide excision repair
    117927338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vri03021]
    117927338
   03400 DNA repair and recombination proteins [BR:vri03400]
    117927338
Transcription machinery [BR:vri03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117927338
  RNA polymerase III system
   RNA polymerase III
     117927338
  RNA polymerase I system
   RNA polymerase I
     117927338
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117927338
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 117927338
NCBI-ProteinID: XP_034702716
LinkDB
Position
12:complement(21509970..21515598)
AA seq 141 aa
MADDDYNDMDMGYEDEPPEPEIEEGAEEDADNNNNEDIPDAIETAEKEQVPVERSRKTSK
YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY
EDWGVDELIVEDSWKRQVGGD
NT seq 426 nt   +upstreamnt  +downstreamnt
atggcggacgacgactacaacgatatggatatgggatatgaggatgaacctccagagcct
gagattgaagagggtgcagaggaggatgctgataataataataatgaagacattccggat
gctatcgaaactgcagaaaaagaacaggtgcctgtggaacgttctcgaaagacttccaag
tatatgacaaaatatgaaagggcaaggatcttgggtacccgtgctctgcagatcagcatg
aatgcacctgtgatggttgagttggagggtgagactgacccacttgagattgcgatgaaa
gaacttcgtgagaggaagatacccttcaccattcgccgctacctgcctgatggaagttat
gaagactggggagttgatgaattgattgtagaagactcatggaagaggcaagtcggtggt
gattga

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