KEGG   Vitis riparia (riverbank grape): 117927365
Entry
117927365         CDS       T07274                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117927365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vri03019]
    117927365
   03041 Spliceosome [BR:vri03041]
    117927365
Messenger RNA biogenesis [BR:vri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117927365
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117927365
Spliceosome [BR:vri03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    117927365
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3
Other DBs
NCBI-GeneID: 117927365
NCBI-ProteinID: XP_034702755
LinkDB
Position
12:14147676..14150407
AA seq 360 aa
MGSRKAPKTHSDDGASPGKIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRG
FGFITYADPSVVDEVIQETHIINGKQVEIKRTIPRGSSQSNDFKTRKIFVGGILTSVSED
EFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTNGNMIDMEGTQVEIK
KAEPKKSSSNPGRAPSFGGDSRMQMYNDGFSGYGSDPYSGLGSGGYGPASYRALGGIDSR
LGDYGGYGGGGSGSEFGASYGGYGGGYRGESSFGPSSRYGSYDIGFGGGYGGSGFGAYGR
GGGGYGGYGGSGSSGGYDAGPGAGYGGVGGVGGGGGGGGGGLYGGRTGYSGSSRYHPYGR
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgggttcgaggaaggctcccaaaactcactcagacgacggagccagtccaggaaagatc
ttcgtgggagggctagccaaggagaccaacttggatactttcacaaagtatttcgagaaa
tatggggagataaccgattcagtggtgatgaaggatcggcaaacgggtcggcctaggggt
tttgggtttatcacatatgctgatccttctgttgttgacgaggtcattcaagagacccat
atcatcaacggcaaacaagttgagatcaaaagaaccattccaagaggttcctcacaatct
aatgatttcaaaacaaggaagatttttgttggtggaattctaacaagtgtctctgaagac
gagttcaagaatttcttctcaaagtatgggaaggtggtggaacacgagattatacatgac
catgtgaccaaacgctcccggggatttgggttcattgtatttgacaacgaacaggttgtt
gatgatctgctgacaaatggaaatatgattgatatggagggtactcaggttgagatcaag
aaggcggaaccaaagaaatcctcctcaaacccaggtcgtgctccttcatttggtggtgat
tctaggatgcaaatgtacaatgatggttttagtggatacggcagcgatccttatagtggt
ctgggcagtggtggctatgggcctgcttcctaccgggcactaggaggtattgacagtagg
cttggtgattatggtgggtatggtggtggtggcagtggcagtgaatttggggccagttat
gggggttatggtggtggttatcggggagagtcctcatttggcccttccagtcgctatggt
tcctatgatatagggtttggagggggttatggcggaagtggatttggcgcatatggccgt
ggaggtggaggctatgggggttatggcggttcaggctcgagtggtggttatgatgcaggt
cctggtgctggctatggaggagtaggaggagtaggaggaggagggggaggaggaggagga
ggactatatggaggtagaacaggttacagtggcagcagccgataccatccttacggaaga
tag

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