Vitis riparia (riverbank grape): 117927367
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Entry
117927367 CDS
T07274
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1-like
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117927367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117927367
03016 Transfer RNA biogenesis [BR:
vri03016
]
117927367
03029 Mitochondrial biogenesis [BR:
vri03029
]
117927367
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
117927367
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
117927367
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
117927367
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
117927367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_C
POP1_N
Motif
Other DBs
NCBI-GeneID:
117927367
NCBI-ProteinID:
XP_034702757
LinkDB
All DBs
Position
12:19163879..19169836
Genome browser
AA seq
825 aa
AA seq
DB search
MATDGFKRSSIAPPPRSLNVEKFAESRASELEALHSIVANRLNNNFRSQRNKRRRTTGHD
NRDANKRFRKREKIGVVDKGNVVTSEKDEKKVPRRIRRRVELRRNTEHGYSTSGDGTKRL
RTHVWHAKRFTMTKLWGFYLPVGLQGRGRGSRALLKWFRHGALVHDACYHIALQLEGPED
LLLSILSMVLVPSPSAHSEDISRSVLSGAAYGRAMLHHIGAPGSKSIAPVTYMWRPIQKK
DTGIGAEHDVDSVNSTRTYECCSSFRQLWVWMHASAFNEGYDALKFACQKLMDETGILIN
CFSLEGQLAKLEIMGSKAFGLLQKILHPIPCKTLKSWQLTKCSSLDHEDQIPSCAILSLT
VDDPRNLPEKKTAVVPEVASNRVLGDASENEAKENTSLEGNQDLDLWDARNGFSPPVEEN
VLCMEKHHQRLAFFCLSDSQSGILNTSSDAQHGSCPILLLKSNNQKGTIGWSIILPLSWV
KAFWIPLVSNGAHAIGLREKHWIACEVELPYFPSDFPDTNAYSSFMATEATTSDEKAKLR
PPPMQALRVPIPPPWISVRSAFDKESTILGDTHPCEETCTRDVANGDSLTNSNKGSCDIS
LKNHNISFEGFVSRTSHMLSYYLNEIHGNHLLLFPKFPDKKSFSELMIDEAKLSRNLNGA
SPINYERNLCFLRVLLHAYKEGSFEEGAVVCAPHLSDISMWTSRSRSTETGLQIPQSSVR
SYFTEQSSGKWELQIPEDTVTRETNRQPIGFVTTGFVRGSKKLKAEALCEAILLARLREE
QWNEMPMKERRKEIYVLVRNLRSTAYRLALATIILEQQEEDVEFM
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctactgatggtttcaaacgatcatcgatagccccacctccacgaagtctcaatgtt
gagaaatttgcagaatcccgagcttctgaacttgaggctcttcactcaattgtggcaaat
cggctgaacaacaatttccggtctcagagaaacaagagaagaaggaccactgggcatgat
aacagagatgcaaacaagagattcagaaagagggagaaaataggggtggttgataaaggc
aatgttgtgacttcggagaaagatgagaagaaagttcctcgtcgcattcgtcggcgagtt
gaactcagaagaaacaccgaacatggttactctacttccggggatggtaccaagaggctg
agaacccatgtttggcatgcaaagcgctttacaatgacaaagctttggggtttctaccta
cctgtgggtttgcaaggcagaggaaggggttcacgggctctcttaaagtggttcagacat
ggagctcttgtacatgatgcttgctaccacattgccctgcaattggagggtccagaggat
ttgttactttcaattctaagcatggtattagtgccttctccatcagctcactctgaggat
atttcccgttctgtgctttctggagctgcctatggaagggctatgcttcatcatattgga
gcaccaggttctaaatcaattgcccctgtaacctatatgtggagacccatacagaaaaaa
gatacaggtattggagcagaacatgatgttgattctgttaacagcacacggacatatgag
tgttgttcttccttccgccagctatgggtgtggatgcatgcctcagctttcaatgaagga
tatgatgctctgaaatttgcttgtcaaaaactgatggatgaaactggcatcttgattaat
tgtttttcccttgagggccaacttgctaaattggaaataatgggatcaaaggcatttgga
cttcttcaaaagatactgcatcctattccttgtaaaactttgaaatcctggcaactgact
aagtgctctagccttgaccatgaagatcagattccttcttgtgcaattctatctcttaca
gttgatgatccacgcaatttgcctgagaaaaagactgcagttgttccagaagtggcatct
aatagagtgcttggtgatgcatcagagaatgaagctaaggaaaatacttctttagaagga
aatcaggacttggatttgtgggatgctaggaatgggttcagtcctccagtggaagagaat
gttctttgcatggaaaagcatcaccagcgtctggctttcttctgtctcagtgactcacag
tctgggatattgaatacttctagtgatgcgcagcatggatcatgcccaattcttctttta
aaaagtaataatcaaaagggcacgattggatggtccattatacttccattaagttgggtc
aaggccttctggattcctcttgtctccaatggggctcacgccataggcttgagagagaag
cactggattgcatgtgaagttgaattgccatattttccttcagatttccctgataccaat
gcatactcatcttttatggcaactgaagcaactacatctgatgaaaaggcaaaacttcgt
cctcctcccatgcaagctttaagagttcccattccacctccatggattagtgtccggtcg
gcttttgataaagaatccactattctgggagacactcatccttgtgaggaaacatgtacc
agagatgtggcaaatggtgattcattaacaaactcaaacaaaggaagttgtgatatatca
cttaagaatcataatatctcattcgaaggatttgtatcaaggacatcccatatgttgagt
tactacttgaatgaaatccatggtaaccatttgcttctatttcctaagtttcctgataag
aagagtttttctgaactcatgatagatgaagccaagcttagccggaaccttaatggggct
agcccaattaattatgaacgaaatttatgtttcctaagagttcttctccatgcttataaa
gaaggttcctttgaagagggagcagttgtgtgtgcaccgcatctttctgatatatcaatg
tggacttccaggtccagaagtactgagacagggcttcaaatacctcagtcctctgtgaga
tcatactttacagagcaatcttctggtaagtgggaactccaaataccagaggacactgtt
accagggaaactaatcgtcagccaattggatttgtcacaactggttttgtacgaggaagc
aagaagctgaaggcagaggctctttgtgaagcaatcttacttgctcgtcttagagaggag
cagtggaatgagatgcccatgaaggaaaggagaaaggagatatatgtcctggttaggaat
cttagatctacagcatacagacttgctcttgccaccattatcctagaacaacaggaagaa
gacgtggagttcatgtga
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