Vitis riparia (riverbank grape): 117927546
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Entry
117927546 CDS
T07274
Name
(RefSeq) pleiotropic drug resistance protein 2-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117927546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117927546
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117927546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA
ABC2_membrane_3
AAA_33
AAA_18
Rad17
AAA_30
AAA_28
AAA_25
AAA_23
nSTAND3
RsgA_GTPase
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
117927546
NCBI-ProteinID:
XP_034702983
LinkDB
All DBs
Position
13:19476924..19484295
Genome browser
AA seq
1480 aa
AA seq
DB search
MAAALAGDDLARSMSSRRKSLGSGSRRSWASASIREVVSAHGDVFQSRREDDEEELKWAA
IERLPTFERLRKGMLKQVLDDGKVVHEEVDFTNLGMQERKHLIESILKVVEEDNEKFLLR
LRERTDRVGVEIPKIEVRFEHLSVEGDAYVGTRALPTLLNSTMNFIEGILGLIRLSPSKK
RVVKILKDVSGIVKPSRMTLLLGPPASGKTTLLQALAGKMDKGLRMEGKITYCGHELSEF
VPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKEAGIKPDPEID
AFMKATAMAGQETSLVTDYVLKILGLDICADIMVGDDMRRGISGGEKKRVTTGEMLVGPA
KALFMDEISTGLDSSTTFQIVKFMRQMVHIMEVTMIISLLQPAPETYDLFDAIILLCEGQ
IVYQGPRENILEFFESIGFKCPERKGVADFLQEVTSRKDQEQYWFRKNEPYRYISVPEFV
QHFNSFHIGQKLSDDLGIPYDRSRTHPAALVTEKYGISNWELFKACFAREWLLMKRNSFI
YIFKTTQITIMSVIAMTVFFRTEMKHGQLQDGVKFYGALFYSLINVMFNGLAELALTIFR
LPVFFKQRDFLFYPAWAFALPIWVLRIPLSLMESCIWIILTYYTIGYAPAASRFFRQLLA
FFVVHQMALSLFRFIAALGRTLIVANTLATFTLLLVSVLGGFVVSKDDIKPWMIWGYYAS
PMMYGQNALVINEFLDDRWSAPNIYTRIPEPTVGKALLKARGMFVDSYWYWISVGALLGF
SLLFNICFIAALTYLDPLGDSKSVIIDEDNEEKSEKQFYSNKQHDLTTPERNSASTAPMS
EGIDMEVRNTRENTKAVGKDANHAPTKRGMVLPFQPLSLAFEHVNYYVDMPAGMKSQGIE
ADHLQLLRDASGAFRPGILMALVGVSGAGKTTLMDVLAGRKTSGYIEGSISISGYPKNQA
TFARISGYCEQTDIHSPNVTVYESLVYSAWLRLAPDVKKETRQVFVEEVIDLVELHPLRN
ALVGLPGIDGLSTEQRKRLTVAVELVANPSIIFMDEPTTGLDARAAAVVMRTVRNTVDTG
RTVVCTIHQPSIDIFEAFDELLLMKRGGQIIYAGPLGRNSHKLVEYFEAVRGIPKIRDGQ
NPATWMMEVSSAAVEAQLGVDLAEIYAKSELYQRNQELIKELSIPSPGSKDLHFPTKYSQ
SFITQCKACFWKQHWSYWRNPSYNALRFFLTIIIGVLFGLIFWNEGEKTDKEQDLINLLG
AMFAAVFFLGATNAASVQPIVAIERTVFYRERAAGMYSALPYAFAQVAIEAIYITIQTFV
YTLLLYSMMGFYWRVDKFLWFYYYLLMCFIYFTLYGMMIVALTPNHQIAAILMSFFLSFW
NLFSGFLIPRMQIPIWWRWYYWASPVAWTIYGLVTSQVGDKEDPVQVPGADDMSVKQYLK
EALGFEYDFLRAVALAHIGWVLLFLFVFAYGIKFLNFQRR
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcattggctggggatgatctagcaaggtccatgagcagcaggcgtaaaagt
ttagggtctggaagtaggcgaagttgggcttctgcgagtattcgtgaggtggtgtcagca
catggtgatgtttttcagagtaggagagaggatgatgaggaagagttgaagtgggcggcc
attgaaaggcttccaacctttgagcggttgaggaaggggatgcttaagcaagttttggat
gatgggaaggttgtccatgaagaagttgacttcaccaatcttggtatgcaggagaggaag
catctcatagagagtatacttaaggttgtagaagaagataatgagaagttccttctcagg
ctcagggaaaggactgatagggttggggttgagataccaaaaatcgaagtccggtttgag
catttatcagtggaaggagacgcatatgttggaaccagggcacttcctactctgctcaat
tctaccatgaacttcatagagggaatacttggactgattaggctttccccatctaagaaa
agggtagtcaagatactaaaagatgtgagtgggatcgtgaaaccatcaagaatgactctg
cttctgggacctccagcctcagggaaaactaccctgctgcaggcgcttgctgggaagatg
gacaaaggtctaaggatggaaggaaaaatcacatactgtggtcatgaattatcagagttt
gttcctcagagaacatgtgcttacattagccagcatgatctgcaccatggtgagatgaca
gttagggaaacgttggacttctcaggacgatgtttgggagttggaaccagatatgaacta
ctagctgaattgtcaagacgagaaaaagaagctggaattaagccagatcctgagatagat
gcattcatgaaagcaacagcaatggcaggccaagaaactagtttggttacagattatgtg
ctcaagatactgggattagatatctgcgctgacattatggtgggagatgatatgagaagg
ggcatttctggtggagaaaagaagcgtgttactaccggagaaatgttggttggaccagca
aaggctcttttcatggatgaaatatcaactggtctggacagttccaccacttttcagatt
gtcaagtttatgaggcagatggttcatatcatggaagtaaccatgataatctctcttctc
caacctgcacctgaaacttatgatctttttgatgccattatcttactatgtgagggccaa
attgtgtaccaaggtccccgtgaaaacatccttgaattctttgaaagcataggcttcaaa
tgcccggaaagaaaaggagttgcagacttcttgcaagaggtgacttccagaaaggaccaa
gaacaatactggttcagaaagaatgaaccttacagatatatctcggtgcccgagtttgtg
caacacttcaactctttccacattggccagaagctttcagacgaccttggaatcccttac
gataggagcagaacccatcctgcagcattggtgacagaaaagtatggaatctccaactgg
gaactcttcaaggcatgctttgctagggagtggctattaatgaagcgcaactcttttata
tacatattcaagactacccagattacgatcatgtcagtaattgccatgacagtgttcttc
agaacagaaatgaagcatggccaactgcaagatggagtaaaattctatggggctctgttt
tatagtctcataaatgtaatgtttaacggactggcagaacttgcattgactattttcagg
ctcccagtgttttttaagcagagggatttcttgttttacccggcatgggcttttgcacta
ccaatttgggtccttaggatccccttgtcactgatggagtcatgcatatggatcattctc
acgtattacactattgggtatgcccctgctgctagtaggtttttccgtcaattactggca
ttctttgtcgtgcatcagatggccctatctcttttccgcttcattgcagcacttggaaga
acactgattgtggccaacactcttgccacctttacattgctattggtttctgttctgggt
ggattcgttgtgtccaaagatgatattaaaccatggatgatatggggatattatgcttct
ccaatgatgtatgggcaaaatgcccttgtcatcaatgaatttcttgatgacagatggagc
gcgcccaacatctatacaagaattccagaacccacagttggaaaagctcttctcaaggca
agaggcatgtttgtggatagctattggtattggatttctgttggtgcactcctggggttt
tctctgctcttcaatatctgtttcattgcagctctgacatatttggaccctctgggagac
tcaaaatctgtcattattgatgaggataatgaagaaaagagtgagaagcagttttactct
aacaaacagcatgatctgaccaccccagaaagaaattcagcatctactgccccaatgtct
gaaggtattgatatggaagtaaggaacactagagaaaacaccaaagcagttggcaaagat
gcaaatcatgcacctactaaaaggggaatggtgttgcccttccagcccttatcgcttgca
tttgagcatgtgaattactatgttgatatgcctgctggaatgaagagccaaggaattgaa
gcggatcatctccaactgctgcgggatgctagcggtgctttcaggccaggtattttaatg
gcattagttggtgttagtggtgctggaaagaccactttgatggatgtgttagcaggaagg
aaaactagtgggtacattgaaggaagtatcagcatttctggttaccccaaaaaccaagca
acttttgctcgtattagtggttactgtgagcagactgatatacattctccaaatgtaact
gtttatgaatctcttgtttactctgcctggctgcgccttgctccggatgtcaaaaaggaa
acaaggcaggtgtttgttgaggaagtaatagatttggttgagcttcaccccctgaggaat
gctttggttggccttccgggaatagatgggctttcaacagaacagaggaagaggctgaca
gtagctgtagaattagttgctaacccctccatcatcttcatggatgaaccaacgacaggc
cttgatgctagagcagctgcagttgttatgcgtacagttagaaacacggtggatacaggg
cggactgttgtctgcaccattcaccagccaagcatagacatctttgaagcttttgatgag
ctactgctgatgaagagaggaggacaaatcatttatgctggacctcttggtcgcaattct
cacaagcttgtagagtactttgaagctgtccggggaattcctaaaatcagagatggtcaa
aatcctgctacatggatgatggaagtcagctctgctgcagttgaggctcaacttggtgtg
gatttggcggaaatttatgctaaatctgaactctatcagaggaatcaggaactcatcaaa
gagctgagcataccatcaccaggatccaaagaccttcatttccccaccaaatactctcaa
agctttattactcaatgcaaggcttgcttctggaaacagcactggtcttattggaggaat
ccttcctataatgctctccggttcttcttgaccataattattggtgttctatttggatta
attttctggaacgaaggagagaagacagacaaagaacaagacctaataaatctgctggga
gctatgtttgcagctgtcttcttccttggagccaccaacgctgcttcagtgcagcctatt
gtggcaattgagagaacagtcttctaccgcgaaagggcagctgggatgtattcagctttg
ccttatgcatttgcccaggtggccatagaggcaatttacatcacaatccaaacttttgtt
tacactcttctcctctactctatgatgggattctactggcgagtggacaagttcttatgg
ttctactactacctactcatgtgctttatttacttcacattgtatggaatgatgattgta
gcgctcactcccaaccatcaaattgctgccattcttatgtccttcttcctaagcttttgg
aatctcttctctggttttctcatccctaggatgcaaataccaatatggtggaggtggtac
tactgggcttcccctgttgcttggaccatctatggactggtgacatctcaggtgggtgac
aaggaggatccggttcaagtacctggagcagatgacatgtcagtgaagcagtatcttaag
gaggctttaggctttgaatatgatttcctgagagcggttgccttggctcatattggttgg
gtcctcctcttcttgtttgtctttgcctatggcattaagttccttaacttccaaaggagg
taa
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integrated database retrieval system
