Vitis riparia (riverbank grape): 117927621
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Entry
117927621 CDS
T07274
Name
(RefSeq) AP3-complex subunit beta-A
KO
K12397
AP-3 complex subunit beta
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117927621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117927621
Membrane trafficking [BR:
vri04131
]
Endosome - Lysosome transport
Others
AP-3 complex
117927621
Endosome - Golgi transport
117927621
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT
AP3B1_C_2
HEAT_2
AP3B1_C
INTS1_R4
Svf1_C
Motif
Other DBs
NCBI-GeneID:
117927621
NCBI-ProteinID:
XP_034703126
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Position
13:26126528..26151088
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AA seq
1140 aa
AA seq
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MFPQFGATAETLSKASTLVFRIGTDAHLYDDPEDANIVPLLDSKFDSEKCEALKRLLALI
AQGVDVSNFFPQVVKNVASQSLEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLGDPNPL
VRAWALRAIAGIRLLVIAPIVLVAVEKCARDPSVYVRKCAANALPKLHDLRIEENTPALE
EIVGILLNDHSPGVVGAAAAAFTSVCPNNLSLIGRNYRRLCEVLPDVEEWGQILLIEILL
RFVIAKHGLVQESIMFQSCCTESSQSEKDGSDINSAFEEDNGDTGRGFMSELVNMVSRCY
IEGPDEYLSRLSYINEVSSGLDRSCFMSGRSNDDVKMLLQCTSPLLWSHNSAVVLAAAGV
HWIMAPREDVKRIVKPLLFLLRSSHVSKYVVLCNIQVFAKAMPFLFAPHFEDFFISSSDS
YQIKALKLEILSSIAMDSSISSIFQEFQDYIRDPDRRFAADTVTAIGLCAQQLPKVANIC
LEGLLALTREEYLIGDFVCMDEETNILIQAIMSIEAILKQDPPAHEKVIVQLVRSLDSIK
VPAARAIIIWIIGEYNTIGEIIPRMLTTVLTYLARCFASEAQETKLQILNTAVKVLLCAK
GKDLWTFKSVLSYVLELAKCDLSYDVRDRAHILKELMSCYLGQDLEEETDCLPQKDIPQI
LAECIFRGQRKPMSPEPINFRFYLPGSLSQIVLHAAPGYEPLPKPCSLLCNDLHQRLNVV
QGIEGSGEGATNSDSYETDDPDMLSQSANEESTSGYSSQNSISRSSGSDEPGSESEDDDN
VDPLIQFSDVGISNKKQNGVSQSGSDSMEELMSKQTLESWLDEQPGLSDPNLSKQSQVRR
SSARISIGDIGGRVKPKIYGLLDPTNGNGLRVNYSFSSEISSTSPQLVCVELIFENCSAE
SMSKVLLVDEESNKCLDSADQSLVATESSMPSQNDVPNLVYMEEIASIEPGQSTKCILQV
CFHHHLLPVKLALWCNGKKYPVKLRPDIGYFIKPLPMDVEVFVNKESHLPGMFEYERRCT
FTDHIREMNSDKGDSSLTKDKFLVICKSLAVKMLSNANLFLVSVDMPVASNLDDASGLRL
RFSSEILSNSIPCLITIMIEGNCSEPLNVTIKVNCEETVFGLNLLNRIVNFLVEPSITHL
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgttccctcaattcggagccacagcagagactctgagcaaagcatcgaccttggtgttc
cggatcggtacggacgctcatctctacgacgaccccgaagacgctaatatcgttcctctt
cttgatagcaaattcgactccgagaaatgcgaagctctcaagcgattgctagctctcatc
gctcagggcgtcgacgtctccaatttcttccctcaggttgtcaaaaacgtggcctcacaa
tcactggaagtaaagaagctggtgtacctgtacctgttgcattatgctgaaaagcgtcca
aatgaagcattgttatcaattaattgtttccaaaaggacttgggggatcctaatccattg
gtgcgggcatgggcactccgtgccatagcaggaatccgtctacttgtaattgcgcctatt
gttctggtggctgtggaaaaatgtgctagagatccctctgtatatgtcagaaaatgtgct
gccaatgctcttcccaagctgcacgatttgcgtatagaggaaaacactcctgcacttgaa
gagattgttggaatattattaaatgaccattctcctggagtagttggagctgctgctgct
gcttttacttctgtttgtccaaataatttgtctttgattggaagaaattatagaaggtta
tgtgaggttcttcctgatgtggaagagtggggtcaaattcttttaattgagatccttttg
cgctttgtaatagcaaaacatgggcttgttcaagaatccatcatgttccagtcttgttgt
actgaaagttcccaatctgaaaaggatggttcagatattaattctgcatttgaagaagac
aatggtgacacaggtcgtggtttcatgtctgaattggtgaatatggtctccaggtgttat
attgaaggaccggatgaatatttatcacggttaagttacataaatgaggtttcctctgga
ttagatcgatcatgttttatgtctggcagaagtaatgatgatgtgaagatgctgctgcaa
tgcacatcgccattgctatggagtcataatagtgcagtggtacttgcagctgctggtgta
cactggattatggccccaagggaggatgtgaagagaattgttaagccgctcttgtttctc
ctgagatcatcccatgtctcaaaatatgtggtgctttgcaacattcaagtgtttgccaaa
gcaatgccttttctctttgccccacactttgaagacttcttcataagttcttcagattcc
tatcaaataaaagctctgaagcttgaaatcctgtcttccattgctatggattcatcaatt
tcatctatttttcaagagttccaggattatattagggatcccgacaggagatttgctgct
gatactgttactgcaattggtttatgtgcgcaacaacttccaaaagtggcaaatatatgc
ttggaggggcttttagctctgactagagaggaatatttgattggtgactttgtctgcatg
gatgaagaaacaaatattttgattcaagcaataatgtcgattgaagcaatcttaaagcaa
gatccacctgctcacgagaaggttatagttcagttggttcgtagtttggattcaatcaaa
gtgcctgcagcccgtgcaattattatatggataataggagagtacaacactataggtgag
ataatcccaaggatgttgaccacagtacttacatatcttgctcggtgctttgcttcagaa
gcgcaggaaacaaagcttcaaattcttaatactgctgtcaaggtcttgttgtgtgcaaaa
gggaaagatctgtggacattcaaaagcgttttaagctatgtgcttgaactggccaaatgt
gacttgagctatgatgttcgtgatcgagctcatattcttaaggaactcatgtcatgctat
ttaggtcaagatttggaggaagaaacagattgtttacctcagaaggacattccacaaata
cttgcagaatgtatatttaggggacagagaaaaccaatgtcacctgagcccattaatttc
aggttttatcttcccggatctctttctcagatagttcttcatgcagctcctggttatgaa
cctcttcccaaaccttgtagtttgctttgcaatgacctccatcagcgcttgaatgtggtt
caaggaattgaaggatcaggggagggagccactaacagtgattcctatgagacagatgat
cctgacatgttatctcaatctgcaaatgaagaaagcacttctggttatagttctcaaaat
tctatttccagatccagtggcagtgatgagcctgggtctgaaagtgaagatgatgataat
gttgacccactaattcagttttcagatgttggcatttctaataaaaagcaaaatggagtt
tcacagtcaggctctgatagtatggaggaattgatgtctaagcaaactcttgaatcatgg
ttggatgagcagcccggtttgtcagacccaaatctgtctaaacaaagtcaagttcgaaga
tcttcagcaagaatctctatcggcgatattggtggaagagttaaacccaaaatctatggc
ctcttagatccaactaatggaaatggtttgagggtgaattattcattttcatcagagatt
tcaagcacgtcaccccagcttgtatgtgtagaacttatctttgagaactgttcggcagag
tctatgtcaaaggtacttctggtagatgaagaatctaacaaatgccttgattctgcagac
cagtctttggttgcgactgaaagctccatgccatctcaaaatgatgtgccaaatttagtt
tatatggaagagattgcatctatagagcctggtcagtcaacaaagtgcattctccaggtt
tgcttccatcaccatcttttgcctgtgaagcttgctttgtggtgtaatgggaagaagtat
cctgttaagctgcggcctgatattggatattttataaaaccacttccaatggatgttgaa
gtctttgtgaataaggaatctcatctccctggaatgtttgaatacgaaagaaggtgcacc
ttcaccgaccacattagagagatgaacagtgataagggtgatagctcactaacaaaagac
aaatttcttgtgatctgcaagagcttagcagtaaagatgctcagtaatgcaaatcttttt
cttgtatctgtggatatgccagtggcttccaaccttgatgatgcatcaggtttacgctta
cgcttcagcagcgagatcttaagcaactccattccctgcttaattaccattatgattgaa
ggtaattgctctgaaccgttgaatgtaaccatcaaagtcaactgtgaagaaactgtattt
ggtttaaatctattgaacaggattgtgaattttctagttgagccctctatcacccactta
tga
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