KEGG   Vitis riparia (riverbank grape): 117927638
Entry
117927638         CDS       T07274                                 
Name
(RefSeq) protein transport protein SEC31 homolog B isoform X1
  KO
K14005  protein transport protein SEC31
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117927638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vri04131]
    117927638
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vri02044]
    117927638
Membrane trafficking [BR:vri04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    117927638
Secretion system [BR:vri02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   117927638
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st WD40 WDR55 TPR_Sec16 TPR_GEMI5 MIOS_WD40 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd SRA1 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 117927638
NCBI-ProteinID: XP_034703150
LinkDB
Position
13:3598879..3614538
AA seq 1129 aa
MACIKGVNRSASVALSPDASYLAAGTMAGAVDLSFSSSANLEIFKLDFQSDDQDLSLVGE
SPSSERFNRLSWGKNGSGSEEFALGLIAGGLVDGNIDVWNPLKLIRSEASESALVGHLSR
HKGPVRGLEFNAIAPNLLASGADEGEICIWDLAAPAEPSHFPPLKGSGSANQGEISFLSW
NSKVQHILASTSYNGTTVVWDLKKQKPVISFSDSNRRRCSVLQWNPDVATQLVVASDEDN
SPALRLWDMRNTITPVKEFVGHTKGVIAMSWCPIDSSYLLTCAKDNRTICWDTISGEIVC
ELPAGTNWNFDIHWYPKIPGVISASSFDGKIGIYNIEGCSRFGIGENEFGAAPLKAPKWY
KRPAGVSFGFGGKLVSFHTKSSAAGASTGGSEVHVHDLVTEQSLVTRSSEFEAAVQHGER
SSLKALCDRKSQESDCLNRSSDDRETWGFLKVMFEDDGTARSKLLTHLGFDMVNEEKDTV
QNDLSQEVNALGLEESTAEKVAYVEEKETTVFPSDNGEDFFNNLPSPKADTPLSTSVNNF
VVEETATVEQMQQEVDGQEESADPAFDECVQRALVVGDYKGAVAQCMAVNKMADALVIAH
VGGSSLWESTRDQYLKMSRSPYLKVVSAMVNNDLMSLVNTRPLKSWKETLALLCTFAPRE
EWTMLCDTLASKLMAFGNTLAATLCYICAGNIDKTVEIWSRSLTAEHEGKSYVDVLQDLM
EKTIVLALATGQKRFSASLYKLVEKYSEILASQGLLKTAMEYLKLLGSDELSPELVILRD
RIALSTEPEKEVPKTMPFDNSQGLAYGADQSSYGVVDSSQHYYQETAPTQMQSSVPGSPY
GDNYQQPFGTSYGSRGYVPPAPYQPAPQPHMFLPSQAPQVPQENFAQPPVTSQPAVRPFV
PATPPVLRNVEQYQQPTLGSQLYPGATNSTYQSGPPGAGSLGSVTSHVGTVPGHKLPQVV
APTPTQRGFMPVNSGVVQRPGMGPMQPPSPTQQAPVQPAITPAAPPPTIQTVDTSNVPAQ
QRPVVATLTRLFNETSEALGGSRANPAKKREIEDNSRKIGALLAKLNSGDISKNAADKLV
QLCQALDNGDFGTALQIQVLLTTSEWDECNFWLATLKRMIKTRQNVRLS
NT seq 3390 nt   +upstreamnt  +downstreamnt
atggcgtgcataaagggcgtgaacagatcggcctccgtggccctctcgccggacgcgtcc
tacctggcggccgggacaatggccggagcggtggatctgtcgtttagttcgtctgcgaat
ctcgaaatcttcaagctcgatttccagtccgacgatcaggacctgtctctagttggtgag
tcgcccagttctgagcggtttaacaggctctcctggggcaagaacggatcggggtccgag
gaattcgcgcttgggcttattgctggtgggctcgtcgacggcaatattgatgtttggaat
cctcttaagctgatccgctctgaggcaagtgaaagtgctcttgttggacatctctcaagg
cataaagggcctgttcgtggtcttgaatttaatgcaattgcaccaaacctacttgcttct
ggagctgatgaaggcgagatttgcatttgggatttggcagcacctgcagaaccttctcat
tttccacctctcaagggtagtggatctgctaatcaaggtgaaatttctttcttatcttgg
aatagcaaggtccaacatatattagcatccacttcatacaatggaacaactgtggtttgg
gacttaaagaagcaaaagccagtgataagtttttcagattcaaatagaaggcgatgctct
gttttgcagtggaatcctgatgttgccactcagctagttgttgcatcagatgaagacaat
tcacctgcccttaggctatgggatatgcgtaacacaataacaccagtgaaagagtttgtg
gggcacactaaaggtgtaattgcaatgtcatggtgtcccattgacagctcttacttgctt
acctgtgccaaggacaatcgaaccatttgttgggacacaatttctggagagattgtctgt
gaattgccagctggtaccaactggaattttgatatacactggtaccccaagatacctgga
gtcatatcagcgtcttcatttgatgggaaaattggcatttataatattgagggttgcagc
cgttttggcattggggaaaatgagtttggtgcagcacccctaaaagctccaaaatggtac
aaacgtccagcaggggtttcatttggttttggaggcaaacttgtttcatttcacaccaag
tcatctgctgctggagcttccactggaggttcagaggttcatgtgcatgacttagttaca
gaacaaagtttggtaacccgctcttccgaatttgaagctgcagtacaacatggagaaagg
tcttcattgaaggctttgtgtgacagaaaatctcaagagtctgattgtctgaacagatct
tcagatgacagagaaacatggggcttcttgaaggttatgtttgaagatgatggaacagca
aggtcaaagctgctcactcaccttggttttgatatggtaaatgaagaaaaagatactgta
caaaatgatctctctcaagaagtgaatgccctcggtcttgaggaaagcacagctgagaaa
gtggcttatgtcgaggagaaagaaaccaccgttttcccttcagataatggggaagatttc
tttaacaatcttcccagtcctaaagctgatacacctttatctacttctgttaataacttt
gttgttgaagagactgctactgtcgaacaaatgcagcaagaggtggatggacaggaggaa
agtgctgatccagcatttgatgagtgtgtgcaacgggctttggttgttggagattacaag
ggggcagttgcacagtgtatggctgtaaataaaatggctgatgctttagttatcgctcac
gtgggtggttcatccttgtgggagagtacgcgtgatcagtacctcaagatgagccgttca
ccctatctaaaggttgtgtctgcaatggtgaacaatgatcttatgagccttgttaacacc
agacctctaaaatcctggaaagaaacacttgctcttctgtgcacttttgcaccaagggag
gaatggactatgctttgtgacacacttgcttcaaagctcatggcttttggcaatacactg
gctgcaactctttgttatatatgtgctggaaatattgataaaacggtggagatttggtcc
cggagtctgactgctgagcatgaaggaaagtcctatgttgatgttcttcaggatttgatg
gaaaaaactattgtccttgctttggcaactggtcagaagcgatttagtgcgtctttgtat
aagcttgttgagaaatattctgaaatactagcaagtcaagggcttttgaaaacagctatg
gagtacttgaaacttttggggtctgatgaactatctcctgaacttgtgatattacgagat
cgaattgctctctccacagaacctgagaaagaggtgcctaagactatgccttttgataac
tctcaaggacttgcatatggtgccgatcaatccagttatggtgtagtggactcctctcaa
cattattatcaggaaacagctccgacacaaatgcagtctagtgttcctggaagtccatat
ggtgacaattatcaacagccttttggtacttcatatggtagtagaggttatgttcctcct
gccccatatcagcctgccccgcagcctcatatgttccttccatcccaggcacctcaagtt
ccccaggagaactttgctcaacctcctgtcactagtcagcctgctgtgagaccctttgtc
cctgccactcccccggtcctgagaaatgttgaacaatatcagcagcccacattgggttct
cagctatatcctggagctactaattctacttatcaatctggacctcctggggctggttcc
cttggtagtgtcacgtctcatgtgggtacagttcctggtcataagctgccccaggttgtg
gctcccactcccacacaaaggggatttatgccagttaattcaggggttgttcaaagacct
gggatgggtccgatgcaacctccaagtcctactcaacaggcaccagttcagccagctatt
acacctgcagctccaccaccaacaatacagacagttgatacttcaaatgtacctgcccag
caaaggccagtagttgcaacattgacaagactgttcaatgaaacgtcagaagccctggga
ggttcacgtgcaaacccagccaagaagcgggaaatagaagataattcaaggaaaattggt
gccttgcttgcaaaacttaacagtggagacatatctaaaaatgctgctgataagcttgtt
cagctctgccaggctttagacaatggtgatttcggcactgccttacaaattcaggtactc
cttacgaccagtgagtgggatgagtgcaacttctggctagcaacactaaagaggatgatc
aagacaaggcagaatgtgagattaagttag

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