Vitis riparia (riverbank grape): 117927709
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Entry
117927709 CDS
T07274
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117927709
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vri04812
]
117927709
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
117927709
Microtubules and associated factors
gamma-tubulin ring complex
117927709
Cytoskeleton proteins [BR:
vri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
117927709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_SCAP
WD40_like
Beta-prop_WDR11_1st
NBCH_WD40
NYD-SP28_assoc
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
117927709
NCBI-ProteinID:
XP_034703250
LinkDB
All DBs
Position
13:25561104..25567807
Genome browser
AA seq
805 aa
AA seq
DB search
MMNFADPSTALLAASGGDTVKLFDVSVEPGDPCALSYSPSPGHQVNSVKWNHTNLVVASA
GDDRKISLWRKNGQSMGTIPVSGTDSGDNIEESILAISFSNKGSRYICSGGSGQVVRIWD
LQRKRCIKWLRGHTDTITGAMYNCKDEHLASISLNGDLILHNLASGARAAELKDPNEQVS
RVLDYSRISRHLLVTAGDDGSIHMWDTTGRSPKVSWLKQHSAPTAGVSFSPSNDKIIATV
GLDKKLYTFDTGSRRPSSCIPYEAPFSSLAFRDDGLILAAGTSNGRVVFYDVRGKPQPFT
VLRAYSSSEAVTSLCWQRSKPVIINESNCTPETALLGGAVEDSILMPDPLPSVTSSSLSL
STAIPASRNPGRSGPSTETSSLTAASGGSVSSSLYLSTEEETPQKNHLRPGGTLARLHAP
RSSYNFKDDMEVFSPLVDIQPITPSLDKLWDNHEAAKKDHLPVDKKPSSLLFPSSSRRFP
FVDDGATDHPIFDWKSSSTSRQDDTRASLSLLGSTPAPSSKSGEDSITPPEAWGGERLSD
KFAHHRQSANLPSRFGMLTTSGLTSGSMLSGLQDLSVSTSQTSMSSLSNSNLGYANLRPK
DVSSSQETSLGFSEHVPFSSISMSLGTKGVTGQTNLELPGTTSLSLPRRFSTYAERIGTT
SSFSDGISLSTGSPKTKKSGAETREELLHSLLSRTDISTAMEPGILPSINGGTSQPQKAP
IQTDSQQGNSFTLQLFQRTLDETLGSFQKSIHEDMKNLHIEILRQFHIQETDMSSVMSSI
LKNQVELMKEVQSLRKENQQLRQLL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacttcgcagatccgtcaacggcgctcttggccgccagcggaggtgacaccgtt
aagctctttgacgtctctgtcgagcctggcgatccttgcgccttgagctactcgccttct
cccggtcaccaagtcaactctgtgaagtggaatcacactaatttggttgtggcgagtgct
ggagatgataggaagatctctctgtggcggaaaaatggacagagcatggggaccattcca
gtttctgggactgatagtggtgacaacattgaggagtctatattggctatcagctttagc
aacaagggatctaggtacatatgctctggaggaagtggtcaagttgtaagaatatgggat
ttacagaggaaacgctgcattaaatggttaaggggtcatactgatacaattacgggtgca
atgtacaattgcaaagatgaacacttggcttccatcagtttaaatggggatcttatttta
cacaaccttgcctctggtgccagggctgctgaactcaaggaccctaatgagcaggtatcg
agagtgcttgactattcccggattagcagacaccttttggtgactgctggagatgatggg
tccatacatatgtgggatacaactggtcgcagcccaaaggtttcttggttgaagcaacat
tctgcaccaactgctggtgttagcttctcaccttcaaatgataagataattgctactgtt
ggtctggataaaaagttatacacttttgatacgggttccagaagaccctcatcttgcatt
ccttatgaggcacctttctcttcattagcatttagagatgatggtttgatactggcagct
ggaacaagtaatggtcgggtggtattttatgatgttcgaggaaaaccacagccctttact
gttcttcgtgcttacagtagttcagaggctgttacaagtttatgctggcaaagatcaaag
cctgttattataaatgaaagcaattgcactcctgagactgctcttttaggaggtgctgtt
gaggattcaatccttatgccagatccacttccttctgtgacatcatcaagcctttcactt
tccacagcaatacctgcttctcgaaatcctggccgttcaggtccctctacagaaacatct
tctcttacagcagccagtggtggatctgtatctagctcgctttatttatctacagaagag
gaaacgccacaaaaaaaccatctgcggccaggtggaacattggcaagattacatgctcct
cgttctagttataacttcaaggatgatatggaggtattttctccacttgtggatattcag
cccattactccctcactcgataagctgtgggacaatcatgaggcggcaaagaaagatcat
ctgcccgttgataagaagccttcatctctattgtttccttcgtccagtaggagattccct
tttgtagatgatggggccactgatcatccaatatttgattggaaatccagttctacttcc
aggcaggatgacacccgagcttccctttcactgctgggatctactcctgctccatcttcc
aagagtggagaagactccatcactcctccagaagcttggggcggtgagagattgtctgat
aaatttgctcatcaccgccagtcagccaatttgccatcccgcttcggaatgttgacaacc
agtggtctgacatcagggtccatgctttctggattacaagatctatccgtgtcaacaagt
cagacgagtatgagctccttgtcaaattcaaatttgggttatgcaaatttgcgccccaaa
gatgtctcttccagtcaggaaacttctttgggattttcggaacatgttccctttagttcg
atatctatgtctctaggcacaaaaggtgtcaccggacagactaaccttgaattgccagga
acaacatctttgagcctccctcgaaggttttccacttatgcggagagaataggcaccact
tcttccttcagtgatgggatatcactttcaacgggttcaccaaaaacaaagaaatcagga
gctgaaacccgggaagaacttttacatagcttgctatcaaggactgacatatccactgcc
atggaaccaggaattcttccatcaataaacggaggaacgtcacaacctcagaaagcccca
atccagacagattcacagcagggaaactcctttacgcttcagctgttccaacgcacccta
gatgagacccttggctcatttcagaagtccatacacgaggatatgaagaaccttcatatt
gaaattctgagacaatttcatatacaggagacggatatgtcaagtgtgatgagctcgatt
ttgaaaaatcaagtggagctgatgaaagaagttcaatctctccggaaagaaaaccagcag
ctccgccaattgctttga
DBGET
integrated database retrieval system