KEGG   Vitis riparia (riverbank grape): 117927709
Entry
117927709         CDS       T07274                                 
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vri03036]
    117927709
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:vri04812]
    117927709
Chromosome and associated proteins [BR:vri03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     117927709
   Microtubules and associated factors
    gamma-tubulin ring complex
     117927709
Cytoskeleton proteins [BR:vri04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     117927709
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_Aladin WD40_Gbeta Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_SCAP WD40_like Beta-prop_WDR11_1st NBCH_WD40 NYD-SP28_assoc Cnn_1N
Other DBs
NCBI-GeneID: 117927709
NCBI-ProteinID: XP_034703250
LinkDB
Position
13:25561104..25567807
AA seq 805 aa
MMNFADPSTALLAASGGDTVKLFDVSVEPGDPCALSYSPSPGHQVNSVKWNHTNLVVASA
GDDRKISLWRKNGQSMGTIPVSGTDSGDNIEESILAISFSNKGSRYICSGGSGQVVRIWD
LQRKRCIKWLRGHTDTITGAMYNCKDEHLASISLNGDLILHNLASGARAAELKDPNEQVS
RVLDYSRISRHLLVTAGDDGSIHMWDTTGRSPKVSWLKQHSAPTAGVSFSPSNDKIIATV
GLDKKLYTFDTGSRRPSSCIPYEAPFSSLAFRDDGLILAAGTSNGRVVFYDVRGKPQPFT
VLRAYSSSEAVTSLCWQRSKPVIINESNCTPETALLGGAVEDSILMPDPLPSVTSSSLSL
STAIPASRNPGRSGPSTETSSLTAASGGSVSSSLYLSTEEETPQKNHLRPGGTLARLHAP
RSSYNFKDDMEVFSPLVDIQPITPSLDKLWDNHEAAKKDHLPVDKKPSSLLFPSSSRRFP
FVDDGATDHPIFDWKSSSTSRQDDTRASLSLLGSTPAPSSKSGEDSITPPEAWGGERLSD
KFAHHRQSANLPSRFGMLTTSGLTSGSMLSGLQDLSVSTSQTSMSSLSNSNLGYANLRPK
DVSSSQETSLGFSEHVPFSSISMSLGTKGVTGQTNLELPGTTSLSLPRRFSTYAERIGTT
SSFSDGISLSTGSPKTKKSGAETREELLHSLLSRTDISTAMEPGILPSINGGTSQPQKAP
IQTDSQQGNSFTLQLFQRTLDETLGSFQKSIHEDMKNLHIEILRQFHIQETDMSSVMSSI
LKNQVELMKEVQSLRKENQQLRQLL
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgatgaacttcgcagatccgtcaacggcgctcttggccgccagcggaggtgacaccgtt
aagctctttgacgtctctgtcgagcctggcgatccttgcgccttgagctactcgccttct
cccggtcaccaagtcaactctgtgaagtggaatcacactaatttggttgtggcgagtgct
ggagatgataggaagatctctctgtggcggaaaaatggacagagcatggggaccattcca
gtttctgggactgatagtggtgacaacattgaggagtctatattggctatcagctttagc
aacaagggatctaggtacatatgctctggaggaagtggtcaagttgtaagaatatgggat
ttacagaggaaacgctgcattaaatggttaaggggtcatactgatacaattacgggtgca
atgtacaattgcaaagatgaacacttggcttccatcagtttaaatggggatcttatttta
cacaaccttgcctctggtgccagggctgctgaactcaaggaccctaatgagcaggtatcg
agagtgcttgactattcccggattagcagacaccttttggtgactgctggagatgatggg
tccatacatatgtgggatacaactggtcgcagcccaaaggtttcttggttgaagcaacat
tctgcaccaactgctggtgttagcttctcaccttcaaatgataagataattgctactgtt
ggtctggataaaaagttatacacttttgatacgggttccagaagaccctcatcttgcatt
ccttatgaggcacctttctcttcattagcatttagagatgatggtttgatactggcagct
ggaacaagtaatggtcgggtggtattttatgatgttcgaggaaaaccacagccctttact
gttcttcgtgcttacagtagttcagaggctgttacaagtttatgctggcaaagatcaaag
cctgttattataaatgaaagcaattgcactcctgagactgctcttttaggaggtgctgtt
gaggattcaatccttatgccagatccacttccttctgtgacatcatcaagcctttcactt
tccacagcaatacctgcttctcgaaatcctggccgttcaggtccctctacagaaacatct
tctcttacagcagccagtggtggatctgtatctagctcgctttatttatctacagaagag
gaaacgccacaaaaaaaccatctgcggccaggtggaacattggcaagattacatgctcct
cgttctagttataacttcaaggatgatatggaggtattttctccacttgtggatattcag
cccattactccctcactcgataagctgtgggacaatcatgaggcggcaaagaaagatcat
ctgcccgttgataagaagccttcatctctattgtttccttcgtccagtaggagattccct
tttgtagatgatggggccactgatcatccaatatttgattggaaatccagttctacttcc
aggcaggatgacacccgagcttccctttcactgctgggatctactcctgctccatcttcc
aagagtggagaagactccatcactcctccagaagcttggggcggtgagagattgtctgat
aaatttgctcatcaccgccagtcagccaatttgccatcccgcttcggaatgttgacaacc
agtggtctgacatcagggtccatgctttctggattacaagatctatccgtgtcaacaagt
cagacgagtatgagctccttgtcaaattcaaatttgggttatgcaaatttgcgccccaaa
gatgtctcttccagtcaggaaacttctttgggattttcggaacatgttccctttagttcg
atatctatgtctctaggcacaaaaggtgtcaccggacagactaaccttgaattgccagga
acaacatctttgagcctccctcgaaggttttccacttatgcggagagaataggcaccact
tcttccttcagtgatgggatatcactttcaacgggttcaccaaaaacaaagaaatcagga
gctgaaacccgggaagaacttttacatagcttgctatcaaggactgacatatccactgcc
atggaaccaggaattcttccatcaataaacggaggaacgtcacaacctcagaaagcccca
atccagacagattcacagcagggaaactcctttacgcttcagctgttccaacgcacccta
gatgagacccttggctcatttcagaagtccatacacgaggatatgaagaaccttcatatt
gaaattctgagacaatttcatatacaggagacggatatgtcaagtgtgatgagctcgatt
ttgaaaaatcaagtggagctgatgaaagaagttcaatctctccggaaagaaaaccagcag
ctccgccaattgctttga

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