KEGG   Vitis riparia (riverbank grape): 117927876
Entry
117927876         CDS       T07274                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117927876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vri04121]
    117927876
Enzymes [BR:vri01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117927876
Ubiquitin system [BR:vri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    117927876
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING
Other DBs
NCBI-GeneID: 117927876
NCBI-ProteinID: XP_034703487
LinkDB
Position
13:complement(3216364..3217309)
AA seq 247 aa
MFETKLLFLQCHNGHTLCSSYKTRVLNKCPTCRQYLGDIRCLALEKMVESLELHCKNEEF
GCPEIIPYHTKLMHEDSCNFQPYSCPWYGCLCSVVGDIPLLVSHLIDYHKAVMLYGCKFK
LEFLIEDLYKYQSYKWDLTIINCFDKPFCLHAEAFLIGSTPIYMAFLNLIGNQAEIDNYS
YSLEIGGNGRKLTFEGIPRSIRESKRSSLESANNLIMLGGMVFSLGGETRMPMLWVTGRI
WKAQIPG
NT seq 744 nt   +upstreamnt  +downstreamnt
atgtttgaaacaaagcttttgttcttgcagtgccacaatggacacacactctgttcaagc
tataaaacaagggtactcaacaaatgtcctacttgtaggcagtacctcggtgatataagg
tgtctagctctggagaagatggtcgaatcacttgaactgcattgcaagaatgaggagttt
ggatgccctgagatcatcccttaccacaccaagctcatgcatgaagactcgtgtaacttt
caaccatatagctgcccatggtatggatgtctgtgctctgttgttggggatattccactc
cttgtttctcacttgatagattatcacaaggcagtcatgctctatggctgcaagttcaaa
cttgaatttttgatagaagatctctataaataccaaagctacaaatgggatttaactatc
atcaattgttttgacaaacccttctgtctccatgctgaagccttccttatagggtcgact
cccatttacatggcattcctcaacctgataggcaaccaagcagagatcgacaactacagc
tacagcctggagataggtggaaatgggcggaagcttacttttgagggcatcccacgaagc
attagagagagtaagaggagtagcttggagagtgcgaacaacctcattatgttgggaggc
atggtgttttccttaggaggggagacaagaatgcccatgctttgggttacaggtcggata
tggaaagcccagattccaggataa

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