Vitis riparia (riverbank grape): 117927876
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Entry
117927876 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117927876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117927876
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117927876
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117927876
BRITE hierarchy
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
117927876
NCBI-ProteinID:
XP_034703487
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Position
13:complement(3216364..3217309)
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AA seq
247 aa
AA seq
DB search
MFETKLLFLQCHNGHTLCSSYKTRVLNKCPTCRQYLGDIRCLALEKMVESLELHCKNEEF
GCPEIIPYHTKLMHEDSCNFQPYSCPWYGCLCSVVGDIPLLVSHLIDYHKAVMLYGCKFK
LEFLIEDLYKYQSYKWDLTIINCFDKPFCLHAEAFLIGSTPIYMAFLNLIGNQAEIDNYS
YSLEIGGNGRKLTFEGIPRSIRESKRSSLESANNLIMLGGMVFSLGGETRMPMLWVTGRI
WKAQIPG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaacaaagcttttgttcttgcagtgccacaatggacacacactctgttcaagc
tataaaacaagggtactcaacaaatgtcctacttgtaggcagtacctcggtgatataagg
tgtctagctctggagaagatggtcgaatcacttgaactgcattgcaagaatgaggagttt
ggatgccctgagatcatcccttaccacaccaagctcatgcatgaagactcgtgtaacttt
caaccatatagctgcccatggtatggatgtctgtgctctgttgttggggatattccactc
cttgtttctcacttgatagattatcacaaggcagtcatgctctatggctgcaagttcaaa
cttgaatttttgatagaagatctctataaataccaaagctacaaatgggatttaactatc
atcaattgttttgacaaacccttctgtctccatgctgaagccttccttatagggtcgact
cccatttacatggcattcctcaacctgataggcaaccaagcagagatcgacaactacagc
tacagcctggagataggtggaaatgggcggaagcttacttttgagggcatcccacgaagc
attagagagagtaagaggagtagcttggagagtgcgaacaacctcattatgttgggaggc
atggtgttttccttaggaggggagacaagaatgcccatgctttgggttacaggtcggata
tggaaagcccagattccaggataa
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