Vitis riparia (riverbank grape): 117927911
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Entry
117927911 CDS
T07274
Name
(RefSeq) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00052
Galactose metabolism
vri00511
Other glycan degradation
vri00600
Sphingolipid metabolism
vri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
117927911
09103 Lipid metabolism
00600 Sphingolipid metabolism
117927911
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
117927911
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
117927911
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-GeneID:
117927911
NCBI-ProteinID:
XP_034703528
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All DBs
Position
13:5863763..5906606
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AA seq
1114 aa
AA seq
DB search
MASLVAQLAFPSDYNRRVWEDPSFIKWRKKDAHVSLHCHDTVEGSLRYWYERNKVDLIAS
SSAVWNDDAVVGALDCAAFWVKGLPFVKSLSGYWKFYLAPGPTSVPMNFYDSSFEDSTWE
TLPVPSNWQMHGFDRPIYTNIVYPFPLDPPHVPTDNPTGCYRTVFHIPHEWKGRRILLHF
EAVDSAFFAWINGVPVGYSQDSRLPAEFEITDYCHPCGSDKKNVLAVQVFRWSDGSYLED
QDQWRLSGIHRDVLLLAKPQVYIEDYFFKSNLGENFSYADIQVEVKIDNSLETSKDSILN
KFSIEAELFDSAKWHDSNEYCDLHSSSVAHMELDPSSSTAIFGFLGYVLVGKLESPKLWS
AEQPYLYTLVVILKDEFGKVVDCESCQVGIRQVSKAPKQLLVNGHPVILRGVNRHEHHPR
LGKTNMESCMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFYG
SQHLKNPTLESSWASSMMDRVISMVERDKNHACIISWSLGNESGYGPNHSALAGWIRGRD
SSRLLHYEGGGARTPSTDIVCPMYMRVWDIVKIAKDPTETRPLILCEYSHSMGNSNGNIQ
EYWEAIDNTFGLQGGFIWDWVDQGLLKVGADGAKHWAYGGDFGDIPNDLNFCLNGITWPD
RTLHPAVHEVKYVYQPIKISLSESTLKITNTHFYETTKAMEFSWTVCGDGCKLGSGTLSL
PIIEPQSSYSIEFESGPWYSLWASSSAEEHFLTITAKLLQPTRWVEAGHVISSTQILLPA
KREFVPHVIKNKDAPVPGEILGNTIRFYQQNVWEIQFNAQTGTIESWKVGGVTVMNKGIF
PCFWRAPTDNDNGGGAKSYVSKWKAAHLDNLSFITESCSVQNITDHPVKLAVVYLGIPKG
EENSLSRSENPKVLLKVDITYTVYGSGDIIMECNVHPCSDLPPLPRVGVEFQLEKTIDQI
KWYGKGPFECYPDRKAAAHVGVYEQNVGDMHVPYIVPVECSGRADVRWVTFQNKDGFGIY
ASMYGSSPPMQMNASYYSTAELERATHKEELIKGDDIEVHLDHKHMGLGGDDSWSPCVHE
KYLIPAVPYSFSIRLSPITAAITGYDIYKSQLQN
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttggtggcacagcttgcttttccttcagattataatcgtagagtgtgggag
gatccatcattcatcaagtggagaaaaaaagatgcacatgtttcattgcattgtcatgat
actgttgaaggatctcttagatactggtatgaacgcaacaaagtggaccttatagcatct
agttcagcagtttggaatgatgatgctgttgttggagctcttgattgtgctgctttctgg
gtcaagggcctgccttttgttaagtctttgtctggctactggaaattttacttggctcct
ggacctaccagtgttcctatgaatttttatgatagttcatttgaggattctacatgggaa
actttaccagttccttcgaattggcagatgcatggatttgatcggcctatttatacaaat
atcgtatatccgtttcctcttgatccacctcatgttcctacagataatcctactggctgt
tacaggacagtcttccacattcctcacgaatggaagggtcgtaggatattgttacacttc
gaagctgttgattctgccttttttgcatggataaatggagttcctgttggatatagtcag
gatagtagacttcctgctgaatttgaaatcactgattactgtcatccatgtggttccgac
aagaagaatgttcttgctgttcaagtatttagatggagtgatggctcttaccttgaagat
caagatcaatggcggttatccggtattcatcgagacgtgcttcttttagccaagccacag
gtctatattgaagattattttttcaaatcaaacttgggcgaaaatttttcatatgcagat
atacaggttgaagtgaaaattgataactcgctggaaacatcaaaagacagcattcttaac
aaattttctatagaggctgaactgtttgacagtgcgaagtggcatgactccaatgaatat
tgtgatctgcattcatctagtgtggctcatatggaactcgacccatcctcctctactgca
atattcgggtttcttggatatgttctagtgggaaaactggaaagccccaagctttggtct
gcagagcaaccttatctttacactcttgtcgtcatcctcaaagatgaatttgggaaggta
gttgactgtgaatcatgccaagtaggtatacggcaagtatcaaaagccccaaaacagcta
cttgttaatgggcatccagtaattttaagaggagtaaataggcacgaacatcatccacgt
ctggggaagacaaacatggaatcctgcatggttaaggatttggttctaatgaagcaaaac
aatatcaatgctgtgagaaacagccattatccccagcatcctcgatggtacgagttgtgt
gatttgtttggcatgtacatgattgatgaagccaatattgagacccatggtttttatggt
tctcaacatttaaagaaccccacattagaatcaagttgggcttcttctatgatggatcga
gtgataagcatggtggagagggacaaaaatcatgcatgcattatttcttggtccttggga
aatgagtctggttatggacctaatcattctgctttggctggttggattagaggaagggac
tcctctaggctattacattacgaagggggtggagctaggactccatcaacagatattgtc
tgccccatgtatatgcgtgtttgggacattgtaaagattgcaaaagatccaactgaaacg
cgacctttgattctatgcgagtactcacattccatgggaaacagcaacggaaatattcaa
gaatattgggaagctattgataacacatttggattacaaggaggctttatctgggattgg
gttgatcaggggctgctgaaggttggtgcagatggtgctaagcattgggcatatggaggt
gactttggggatatccctaatgatttgaacttctgtctgaatggcattacatggccagat
cgaactcttcatcctgcagtacatgaagttaagtatgtctatcaaccaatcaagatttct
ttaagtgagagcacacttaagataacaaacactcatttttatgaaacaacaaaagcaatg
gagtttagctggactgtctgtggggatggatgcaaacttggatctggaaccctatctctc
cccataatagaaccccagagcagctactctatcgaatttgagtcaggaccatggtattct
ctatgggcttcgtcttctgcagaagaacattttttaacaataactgcaaagctcttgcaa
cccacacgctgggttgaagctggtcatgtcatttcatcaacacaaatcctgttgcctgcc
aaaagagaatttgttcctcatgtcatcaaaaataaagatgctcctgtccctggtgaaatt
cttgggaatacgattagattctaccagcagaatgtttgggagatacaatttaacgctcaa
actggaaccattgaaagctggaaggttggtggagttactgtgatgaataagggcatattc
ccatgcttctggcgggcacctacagataatgacaatgggggaggtgcaaaaagttatgtc
tctaagtggaaagcagcccatcttgataacctatcctttatcactgaaagctgttctgtt
cagaatataacagatcatcctgtaaaactggctgtggtttatcttggcatcccaaagggt
gaggagaattctttatccagatctgagaatccaaaggttttactcaaggttgacataact
tacacagtctatggttctggtgacatcattatggaatgtaatgtccacccatgctctgat
ctcccacccttgccacgtgtgggggttgaatttcagttggaaaaaacaattgatcagatt
aaatggtatggcaaaggaccatttgaatgttatccagatcggaaagcagctgctcatgtg
ggggtctatgagcagaatgtgggtgatatgcatgttccctatattgttcctgtagagtgt
tctggtagagcagatgttaggtgggtaacatttcaaaacaaagatggttttggaatttat
gcatccatgtatggcagctctccaccaatgcaaatgaatgcaagttactatagcacagca
gagcttgaacgggcaacacataaggaagagcttatcaaaggagatgatattgaggtgcat
ctggaccacaagcacatgggtttgggtggcgatgatagctggtctccctgtgtccatgag
aaatacctgattccagcagtgccatactctttctctatcaggctgtctccaataactgca
gccataactggctatgacatctacaaatcccagcttcagaactaa
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