Vitis riparia (riverbank grape): 117927983
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Entry
117927983 CDS
T07274
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vri03032
]
117927983
03400 DNA repair and recombination proteins [BR:
vri03400
]
117927983
Enzymes [BR:
vri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
117927983
DNA replication proteins [BR:
vri03032
]
Prokaryotic type
DNA Topoisomerases
117927983
DNA repair and recombination proteins [BR:
vri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
117927983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Syntaxin-18_N
RNAseD_HRDC_C
Motif
Other DBs
NCBI-GeneID:
117927983
NCBI-ProteinID:
XP_034703618
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All DBs
Position
13:complement(10902912..10981719)
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AA seq
928 aa
AA seq
DB search
MKPCFTTTALFHPPMAFSAASSLLRHQFSLPLHHRLSYLRFLSVTAPPRKPHLVRARRRD
DEEGNGSLVLKEKDGRDGRIVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRI
LFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIQGHGN
FGSVDADPPAAMRYTECRLEALTEAMLLADLEQDTVDFLPNFDNSQKEPSLLPARLPTLL
LNGSSGIAVGMATNIPPHNIGELVDVLCVLIRNPEATLQELLEYMPGPDFPTGGLIMGNI
GILEAYRTGRGRIIVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSSLVEKIAELVENKSL
DGISDIRDESDRSGMRIVIELKRGSDPSIVLNKLYRLTALQSSFSCNMIGILDGQPKLMG
LKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGIVVGLDNLDAVIRVIKEAPSNAMA
STGLRNEFGLSERQAEAILDISLRRITRLEREKFVTESKSLMEQISKLQELLSSRKQILQ
LIEQEAIELKNRFSTPRRSMLEDTDSGQLEDVDVIPNEEMLLVHNWASRKGYVKRMKPNT
FNLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDYVLYFSDRGIVYSARAYKIPECTRTAAG
TPLVQILCLSDGERITSIIPVSEFAEDQFLLMLTMNGYIKKVSLNFFSSIRSTGIIAIQL
VPGDELKWVRCCTNDDLVAMASQNGMVILSSCEIIRALGRNTRGSIAMRLKQGDKMASMD
IIPAAIRKDLEKALEDRQSRARNLNGPWLLFVSESGLGKRVPLSRFRLSPLNRVGLIGYK
FSAEDHLAAVFVVGFSLTEDGESDEQVVLVSQSGTINRIKVRDISIQSRFARGVILMRLE
YAGKIQSASLMSATETETDDEEAVAVTQ
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccctgcttcaccaccactgctctcttccacccaccaatggccttctctgcagct
tcttcgctcctccgccaccagttctccctccctctccaccatcgtctctcttacctccgc
ttcctctccgtcaccgctcctccgcggaaacctcatttggtgagggctcgccgccgggac
gacgaggaaggcaacgggagcttggttctcaaggaaaaggatggccgagacgggagaatt
gtgcccaccgaactgcacaaggaggccaccgaggcctacatggcctacgccatgtcggtg
ctgcttggacgcgctctgccggatgtgcgcgacgggttgaagccggtgcaccgtcggatt
ctatttgcaatgcatgaattgggcctttcatcacgaaaaccatacaagaaatgtgctaga
gttgttggagaggttctggggaaatttcatccacatggagacactgcagtctatgattcc
ttggtgcgaatggcacaggatttttccttacggtgcccgcttattcaagggcatggaaat
tttggttcagttgatgctgatcctcctgccgctatgcgatacacggagtgcagactggaa
gcactcacggaagcaatgttattggcagatttagagcaagatactgttgattttctgccc
aactttgataattctcaaaaagaaccctcacttctacctgctcggctcccaactttattg
ttgaacggttcttctgggattgcggttggaatggccactaatattcctccacataatatt
ggagagttggtagatgtgctttgcgtgctaattcgtaatcctgaagccacgctgcaagaa
ttgttggaatacatgcccggacctgactttccaactggaggactaatcatgggaaatatt
ggcatcttagaggcatatcgaactgggcggggacgtataatagtcagaggaaagactgag
gttgaattgctcgactctaaaaccaagaggactgcagtcataataaaagagatcccctat
cagacaaacaaatcctcacttgtggagaaaattgctgagcttgtggaaaataagagtttg
gatggcataagtgatattcgggatgagagtgatcgttctggaatgcgtatagtgattgag
ctaaaacggggatcagatccatcaattgttttgaataaactgtaccgtcttactgctctt
cagtctagttttagctgcaacatgataggtattctcgatggacaacctaaactgatgggt
ctgaaggagttgcttcaggcattcttagattttagatgctctgttgttgagaggcgagca
aggtttaagctgtcacaagcacaagaaagaagacatattgttgagggtattgtggtgggg
cttgataatttggatgcagtaattcgtgtaattaaggaagctccaagtaatgcaatggca
tcaactggtttgagaaatgagtttggtttatctgaaaggcaggctgaagctatattggac
ataagcctaagaaggatcacacgtctggagagagaaaagtttgtaactgaaagtaaatcc
ttgatggaacaaatttcgaagttacaggaactattgtcaagcaggaaacagatattacag
ctaatcgaacaagaagcaattgagctgaagaacaggttttccactccgaggcgttcaatg
ttggaggacactgatagtggtcaacttgaagatgtggatgttataccaaatgaagaaatg
ctactggtacacaactgggccagtcgaaaaggttatgtcaagcggatgaaacctaatacc
ttcaatctccaaaatcgtggaacaattggtaaatctgttgggaaattgagagtgaatgat
gcaatgtcagacttcattgtttgtcatgcacatgactatgtcctgtatttcagtgatagg
ggaatagtgtactcagctcgtgcatataaaattccagaatgcacccgaactgctgcaggc
acaccactggttcagatcttatgtttatctgatggtgagagaataacttccataattcct
gtgagtgagtttgctgaagatcagtttctactgatgcttacaatgaatggatacatcaag
aaagtatcattgaattttttctcctcaatccgatcaacaggaatcatagcaattcaattg
gttcctggtgatgagctcaaatgggtccgttgctgtaccaatgatgaccttgtggccatg
gcttcacagaatggaatggttattttgagctcctgtgagattattcgagctctaggaaga
aatactagggggtccattgccatgagattgaaacaaggggataagatggcaagcatggac
ataataccagcagcaattcggaaagacttggagaaggcattagaagaccgccagagccgt
gctaggaacctcaatggtccatggttactgtttgtgtctgagagcggtctgggaaagcgg
gttcctctgagtagatttcgcttgtcacctttgaatagagttggtttaataggttacaag
ttttccgcagaagatcacttggcagcagtgtttgtggttgggttttcactgacagaagat
ggtgaaagtgatgaacaagtagttctagtgagccaaagtgggaccattaatagaattaaa
gttcgggatatttctatacagtcacggtttgcaaggggagtaattctaatgcggctggag
tatgctggaaagattcagtcagcttcattaatgtcagcaacagaaacagagactgatgac
gaagaagctgttgctgttacacagtaa
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