Vitis riparia (riverbank grape): 117928052
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Entry
117928052 CDS
T07274
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117928052
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117928052
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
117928052
NCBI-ProteinID:
XP_034703710
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Position
13:2104751..2107939
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AA seq
436 aa
AA seq
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MLPQSLFLSLFFTLISSPSCFSSFQDDNLANFLDGTPGPSAYPPFFGTIDKDRAVDFEAS
FANLQMEYEAEIVDSTRYDHLGTPATSLGEVNVDDFGAKGDGVTDDTEAFKTAWEETCSS
NTAVLVVPQNKKYHVKPITFSGPCKSDSVKLKILGTIKASEDPSDYAKDRSRWLLFYNIK
NFQVEGQGTIDGNGKIWWKNSCKINITQPCTMAPTAVSFVQCDNLKVYGLNVQDAQQMHV
RFEESMNVQASNIMVTSSEESPNTDGIHVTQSENVQIIKTVIKTGDDCISIVNGSTNIEA
IDVTCGPGHGISIGSLGKGKSEARVSNVMVNTAKLIGTTNGVRIKTWQGGSGYAENIVFQ
DIKMENVSNPIIIDQNYCDQETPCNEQNSAVQIRNIVYNNITGTSATKMTTIFNCSKTLP
CQGIVQKDINLVYKEN
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcttccacaaagtctttttctctcacttttcttcactttgatctcttctccttcgtgt
tttagcagtttccaggatgataaccttgctaattttcttgatggaacacctggcccaagt
gcctaccccccattttttggcaccattgataaggaccgggccgttgactttgaggcaagt
ttcgcgaacctgcagatggagtacgaagctgaaatcgtcgattccacaaggtatgatcac
ctgggtactcctgcaacttcactgggagaggtaaatgtcgatgattttggagctaaaggt
gatggagtaacagatgatactgaggcattcaagacagcttgggaggagacttgttcttcc
aacacagctgtgcttgttgtccctcagaataagaagtatcatgttaagccaattacattt
tcaggcccttgcaaatctgattctgtaaagttgaagatcctgggaacgatcaaggcttct
gaagatccttcagactatgcgaaggataggagccgatggctcttgttctacaacataaaa
aacttccaagtagaaggtcaaggaaccatcgatggcaatggaaagatatggtggaaaaac
tcatgcaaaatcaacattactcaaccttgcaccatggcaccaacagcggtatccttcgtc
caatgcgacaacttgaaagtgtatggcctcaacgtacaggatgcccagcaaatgcatgtt
aggtttgaggaatctatgaatgttcaagcttctaatatcatggtgacttcatcagaggag
agccctaacactgatggaattcatgtgacacagtccgaaaatgttcagatcattaaaact
gtaatcaaaacaggtgatgactgcatttccattgtaaatggatcaacaaacattgaagcc
atagatgtaacctgtggaccaggtcatggaatcagtattgggagcttaggaaaagggaag
tcagaagctcgtgtttcaaatgtgatggtgaatacggcaaaactcataggaaccactaat
ggagtgagaataaagacttggcagggaggatcagggtatgctgaaaacatagtatttcaa
gacattaagatggaaaatgtgagcaaccccataatcatagaccaaaactactgtgatcaa
gaaactccatgcaatgaacagaactcagctgtccaaataagaaacatagtctacaacaac
atcacaggcacaagtgcaacaaaaatgaccacaatattcaactgcagcaagaccttacct
tgccaaggcattgtgcagaaggatataaatctagtatacaaagagaactga
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