Vitis riparia (riverbank grape): 117928109
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Entry
117928109 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: anaphase-promoting complex subunit 1
KO
K03348
anaphase-promoting complex subunit 1
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117928109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117928109
03036 Chromosome and associated proteins [BR:
vri03036
]
117928109
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
117928109
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
117928109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC1
APC1_C
Apc1_MidN
APC1_3rd
PC_rep
Motif
Other DBs
NCBI-GeneID:
117928109
NCBI-ProteinID:
XP_034703841
LinkDB
All DBs
Position
13:28647078..28684654
Genome browser
AA seq
1827 aa
AA seq
DB search
MSVGLRRLSVLGEFKPFGLISEALDGKPSDTVLDNYDYFVFDPQVARERDESDAGDAPVS
ALSDRCDHELFIRGNRIIWSTGSRVYKRFTLPSSVVKACWCRLGDMSEALLCVLQIDSLT
IYNTSGEVVSIPLSRTVTSIWPLPFGLLLQQASEWISPSHLPFSSSSPLLGGRDITRPKR
EIGHSPRQNFSLLNTFDYIIKGDGASFSSHLILKDPLEEPHSTYIEERGKLNIMKEFDER
TIWTSDLIPLMASYNKGKMQHSVWVAEVINSSLEVSNASLSDVIPAGVLPKQFSFRRIWQ
GKGAQTAACKVFLATDDDAAPLICFLLQEQKKLLSVRLQSVEINNEIVFDIKPDMSWSIP
AVAAVPVIVTRPRAKVGLLPFADILVLASENTLLLYSGKQCLCRYLLPCSLGNRLVSSHT
LDSSEPASSFRDLKIVGLADAVDGRVNVIVNSGQMFRCALRRSPSSSLANDCIAAMAEGL
SSSSYNHFLALLWGDGDAGSLSKADSNVDSEWESFSSIIMHMCKKSGLIPPKLMDTVPHT
SWEFLINSNFHKNYSKLNLITGISSKMSLELQESDSSKSYSDGGRGLEKLSYSEPLKETL
DSLHAVYESLKLDNLRKRDLGLLVVLLCNVANFLGEGSYLDHYVRDFPGISKKLGMCKAC
LSQTTPPSLFRWLEHCLQYGCNSANINDLPPLIRKDGHSVIWARKIVSFYSLLSGAKQVG
RKLSSGVYCNLATGSSSSSEELTVLAMVGEKFGLQQLDLLPAGVSLPLRHALDKCRESPP
TDWPATAYVLLGREDLALSCLAHSHKYKELEIQTNVNLISMSTPYMLHLHPVTIPSTSSD
TIGLDNTKFEDTDSVDGSMTDGMEHIFNSSTQLRYGRDLRLNEVRRLLCSARPVSIQTSV
NPSASDQDVQQAQLWQLAQRTTALPLGRGAFTLATTCTLLTEALAVPKLVLAGRLPAQQN
ATVNLDPNIRNIQELKSWPEFHNAVAAGLRLAPLQGKMSRTWIIYNKPEEPNVVHAGLLL
ALGLHGYLCVLTITDIYQYYAQVHESTTVGLMLGLAASYRGTMQPAISKSLYVHIPARHP
SSFPELELPTLLQSAALMSLGILFEGSAHPQTMQILLGEIGRLSGGDNVLEREGYAVSAG
FSLGLVALGRGEDALGFMDTLVDRLFQYVGGKELHNERFLPLTSSTDHHYRGAGQVMDGT
PVNVDVTAPGAIIALALIFLKTESEVMVSRLSIPHTQFDLQYVRPDFIMLRVIARNLIMW
SRVHPSKDWIQSQIPEIIKNGVKXLGDEIGDTDEMDAEAFVQAYVNIVAGACISLGLRFA
GTKNGNAQELLYEYAVYFLNEIKPVSIASGNTLPKGLSRYVDRGSLETCLHLIVLSLSVV
MAGSGHLQTFRLLRFLRSRTSADGHANYGFQMAVSLAIGFLFLGGGMRTFSTSNSSIAAL
LITLYPRLPTGPNDNRCHLQAYRHLYVLATEARWIQTVDVDTGLPVYAPLEVTVRETEHF
AETSFFEVTPCILPERATLKRVRVCGPRYWPQVIEIVHEDKPWWSFGDKNNPFNSGVLYI
KRKVGACSYVDDPIGCQSLLSRAMHKVFGLTSLRTSGSSTSDQNGPGSVAVDQLVSTFSS
DPSLIAFAQLCCDPSWNGRSDADFQEFCLQVLFECVSKDRPALLQVYLSLYTTIGSMADQ
VTCGNVVLGDSLFISSLKLALAYNEALLSGRLTASKGGIVQPVFIGSLMRRVEGLLNYSP
GLKNDFYNYLNLGKWPSEESQGGKDSILLSWYLQWFCVPAPSIVKTAVEKIRPKFKRSSI
PLLRLLLPKTHINAIGEIDKFFLCSQS
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcggacttcgccgcctcagcgtgcttggcgaattcaaacccttcggtttgatc
tccgaagctctcgacggcaagccttctgataccgtcctcgataattacgattacttcgtt
ttcgatccccaagtcgcgagggagagagacgaatccgatgcgggtgacgcgccagtctcg
gcattgagcgaccgatgcgaccatgaactgttcatcagagggaatcggataatatggtcg
acaggttcacgagtgtataagagattcaccctaccttcctcagttgttaaggcatgctgg
tgtcgtctgggtgacatgtcggaagctcttctctgtgtcctacagattgatagtttgaca
atctataacacatctggtgaagttgtatccattccactctctcgtaccgtcacatcaata
tggcctcttccatttggtttactcctccagcaggcgagtgaatggatctcaccatcacat
cttcctttttcatcttctagtccactattaggtggacgtgatataacccgtccaaaaaga
gaaattggtcatagtccacgacagaattttagtttactgaacacatttgattacattatc
aaaggagatggagcttcattctcttcacatctgattctgaaggaccctctggaagaaccc
cattcaacttatattgaagaaaggggaaaattgaacataatgaaggagtttgatgaaaga
acaatttggactagtgatcttattcctctaatggcatcatataataaaggaaagatgcaa
cattctgtgtgggttgcagaagtcattaattctagccttgaagtctcaaatgccagttta
tctgatgtaattcctgctggggtgttaccaaaacaattctcattccgaaggatttggcag
gggaagggtgcccagacagctgcttgtaaggtttttctggctactgatgatgatgcggca
ccattgatttgttttcttctccaagaacaaaaaaaattgttgtctgtgaggcttcaaagt
gttgaaataaataatgagattgtctttgatattaaacctgacatgagctggagtataccg
gcagttgccgctgtgcctgtgattgtgacacgtccaagagcaaaagtgggactgctgcca
tttgcagatatccttgttttggcttcagaaaacacccttcttctatattcagggaagcaa
tgcctgtgtaggtatttgttgccttgttctttgggtaacaggctggtgtcatcacatact
ctggattcttcagaaccagcatcttctttccgtgacttaaagattgtaggattagctgat
gctgttgacgggcgtgtcaatgtaatcgtaaacagtgggcagatgtttagatgtgcattg
cgaaggagcccttcatcttccttggcaaatgattgcatcgcagcaatggctgaggggctt
agttccagttcctataatcattttcttgctcttctatggggagatggtgatgctggctct
ttgtctaaggctgactctaatgttgattcagaatgggagtcttttagtagtattataatg
catatgtgcaaaaagtcaggattgattcctccaaagctcatggatacagtgccacacaca
tcctgggagtttcttattaacagcaactttcacaagaactactctaaacttaatttgatc
actggaatttcttccaaaatgtcacttgagttgcaggaatcagattcttctaaatcatat
tcggatggtggacgaggcctagaaaaattatcatattctgagcctttgaaggagactttg
gactccctccatgcggtatatgaaagtttgaaattagataatcttcgcaaaagggacttg
ggacttctggtggttctattatgtaatgttgctaattttctaggagagggaagctacttg
gaccattatgttcgtgattttcctggtatttctaagaaacttgggatgtgtaaagcctgt
ctttcccagacaactcctcccagtctattcagatggcttgaacattgcttgcagtatgga
tgtaattctgctaatataaatgaccttccacctctgattcgtaaagatggccattcagtt
atctgggcccggaagatagtttccttctatagtctgttatctggtgcgaaacaagtgggg
agaaaactttcatctggtgtttattgtaaccttgctacaggatcatcttccagttctgag
gagttgacagtcttggcaatggttggggaaaaatttggacttcaacagctggacttactg
cctgctggtgtatcccttcctcttcgacatgcattggataagtgccgggaatctcctccc
accgattggccagcaactgcatatgttcttcttggtcgagaggatttggctttgtcatgt
ttggctcattcacacaaatacaaggaacttgagatccaaaccaacgtgaatttaatttct
atgtctactccttatatgctacatttgcatccagttactattccttccacatcttctgat
acaattggattggacaataccaagtttgaggatacagattctgttgatggatccatgaca
gatggcatggagcatattttcaattctagcactcagttgcgatatggtcgggatctccga
ttgaatgaggttagacgccttttgtgctctgcaagacccgtgtcaattcaaacatcagtt
aaccccagtgcctctgatcaagatgtccaacaggctcagctatggcagcttgcacaaaga
actactgctcttcctcttggccgaggagcatttactcttgcaaccacttgtactctttta
acagaggcactcgcagtcccaaagcttgttttagcaggtcggttgcctgctcaacaaaat
gcaactgttaatcttgatccaaatatacggaatatacaagaactgaaatcttggccagag
tttcacaatgctgtagctgctgggcttaggctggcccctcttcagggaaaaatgtcaaga
acatggataatatacaacaaacctgaggagccaaatgttgttcatgctggacttctcctt
gcgctaggattacatggatatctgtgtgttttaaccataactgacatataccagtattat
gcacaggtacatgaaagcacaactgtaggattaatgcttggcctggcagcttcttatcgg
gggaccatgcaaccggcaatatcaaagtctctttatgttcatatacctgctcgtcatcca
tcttcctttccagaattggaattgccgacccttctgcagtcagcagctctcatgtctctt
gggattctttttgaaggatctgctcacccacaaactatgcaaattcttctgggtgaaata
ggccgtttaagtggtggtgataatgtacttgaaagggagggttatgctgtttctgcagga
ttttcattgggacttgttgcattgggtcgaggggaagatgcacttggtttcatggatact
ttagttgatcggttatttcaatatgttggtggcaaagaactccataatgagagattcctg
cccttgacatcatccacagatcatcactatcgtggtgctgggcaggtgatggatggaacc
ccagtcaatgttgatgtcactgctcctggagctataattgctctggctttaatatttctg
aagactgaatcagaggtgatggtgtctaggctttctatccctcatacacaatttgatttg
caatatgtgaggcctgatttcataatgcttcgcgtcattgctcggaatttgataatgtgg
agcagggttcatccgtctaaagattggattcagtctcagatccctgaaattatcaaaaat
ggggtaaagngtctgggtgatgagattggtgatactgatgaaatggatgcagaagctttt
gttcaggcatatgtcaatatagtggctggagcttgcatttcccttgggttgaggtttgct
ggtacaaaaaatggaaatgcacaggagttactttatgagtatgctgtctactttcttaat
gagatcaagcctgttagtattgcaagtggaaatactttaccaaaaggattgtctcgttat
gtcgatcgaggctcactggagacctgccttcacctcattgttctttccctgtctgtggtt
atggcaggttctgggcatttacaaacatttagattattgaggtttcttcgcagtcgaacc
tcagcagatggacatgctaattatggttttcaaatggcagtaagcttagcaattggtttc
ttgtttcttgggggaggaatgcgaaccttttcaactagcaacagttctattgctgctttg
ctgattactctatatccacgcttacccactggacccaatgacaatcgttgtcatcttcag
gcatacaggcatttgtacgtccttgcgacagaagctcgctggattcaaacagttgatgtt
gacacaggcctaccagtttatgcccctcttgaagtcactgttagggaaacggaacatttt
gcagaaacaagtttttttgaggtcaccccttgcatactgccagaacgtgctactttgaaa
agagtacgtgtatgtggccctcgatattggcctcaagtaatagagattgttcatgaagat
aaaccatggtggagttttggagacaagaataatccttttaattctggtgtgctgtatatc
aagcggaaggttggagcttgttcatatgtggatgaccccatagggtgtcagtcattgctg
tcacgagcaatgcacaaggtttttggtctgacaagtctcagaactagcggttcaagtacc
agtgatcagaatggaccaggatcagttgcagttgatcagttggtcagcaccttttcatct
gatccaagcttaattgcttttgcacagctttgttgtgacccttcttggaatggcagatct
gatgctgatttccaggaattttgcttgcaagtactgttcgagtgtgtgagcaaggacaga
ccagctcttttacaggtctacttgtcattatacacaacgattgggtctatggctgatcag
gttacctgtggaaatgttgttctgggagactcgctcttcatctctagtttaaagcttgca
ctagcctacaatgaggctctgctgagtgggagattgacagcttcaaaaggaggcatcgtt
caacctgtctttattggatctctcatgagacgggtagagggtctactaaattattctcca
ggattgaagaatgatttctacaattatttgaacttgggaaagtggcccagtgaggaatcc
cagggaggaaaagattcaatactcttatcttggtaccttcagtggttctgtgtgccagct
ccatctatagtcaagacagccgtggaaaaaatcaggcccaagttcaaaagatcttccatc
cccttgttgcgcttgttgttgccaaaaacccacattaatgccatcggtgagatagataag
ttctttctctgttcacagtcttag
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