KEGG   Vitis riparia (riverbank grape): 117928180
Entry
117928180         CDS       T07274                                 
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69 isoform X1
  KO
K15687  E3 ubiquitin-protein ligase makorin [EC:2.3.2.27]
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vri04121]
    117928180
Enzymes [BR:vri01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117928180
Ubiquitin system [BR:vri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117928180
SSDB
Motif
Pfam: zf-CCCH_4 zf_CCCH_4 zf-CCCH Torus zf-CCCH_2 zf-CCCH_3 zf-C3HC4 zf-RING_2 zf-RING_5 RING_XB3-XBAT31 zf-RING_UBOX zf-rbx1 zf-CCCH_9 zf-C3HC4_2 zf-ANAPC11
Other DBs
NCBI-GeneID: 117928180
NCBI-ProteinID: XP_034703971
LinkDB
Position
13:complement(1668111..1675885)
AA seq 361 aa
MSKRVLCKFFAHGACLKGDHCEFSHDWNASPNNICTFYQKGVCSYGSRCRYEHVKVSHSQ
PSAPSSSTSSHQLLVPDSASLTHPSRTVTNGLIPAPGVPPEPSTSSRPLFPPTQPAWNQE
SRDQDFLENNIGEPRTDRPADQSICSFAAAGSCPRGEKCPHIHGDLCPTCGKHCLHPFRP
EEIEEHLRTCEKKQKHLEALKHSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISC
IRNWRSSSPASGMDINTALRACPICRKLSYFVIPSVIWYSTKEEKQEIVDSYKAKLRSID
CKHFDFGNGTCPFGTSCFYKHAYRDGRLEEVVLRHLGAEDGHVMIAKNIRLSDFLGGLHI
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtcgaagagggtactatgcaagttctttgctcatggagcatgtcttaaaggggaccat
tgtgagttttcacatgattggaatgcctcaccaaataatatttgcaccttttatcaaaaa
ggtgtctgctcatatggtagtcgatgcagatatgaacatgttaaagtttctcattctcag
ccttctgctccatcttcatcaacaagttctcaccagttgctggttccagattctgcttct
ctcactcatccttctagaactgtaacaaatgggttgattccagccccaggtgtccctcca
gagccatcaacttctagtcgacctttatttccacccactcaaccagcatggaatcaagag
tctagggatcaggatttcttagaaaataatattggagaacctaggactgataggccagct
gaccagtccatctgttcatttgctgctgctggtagctgtccacgtggggagaaatgtcct
catattcatggcgacttgtgccccacatgtggaaaacattgcttgcatcctttcagaccc
gaggaaatagaagaacatttaagaacttgtgagaaaaagcaaaagcatcttgaggcatta
aaacatagtcaagaaatagaatgcagtgtgtgcttagatcgtgttctttcaaagcccaca
gcagctgaacggaagtttggattgctttcagaatgtgatcatccattctgtatatcctgt
atcagaaattggcgtagtagttcaccagcctctggaatggatatcaataccgcattgagg
gcctgcccaatttgtcgcaagctttcatattttgtcattccgagtgtcatttggtattca
acaaaagaagaaaagcaggaaatcgttgacagctacaaagcaaaactcaggtctattgac
tgcaagcactttgattttggaaatgggacatgcccttttggcactagttgtttttacaag
catgcataccgtgatggtcgcctggaggaggtagttctgcgtcatctcggggccgaagat
ggacatgttatgatcgctaaaaatatcaggctatcagacttccttggtggcttgcatata
aggtga

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