Vitis riparia (riverbank grape): 117928188
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Entry
117928188 CDS
T07274
Name
(RefSeq) heat shock cognate 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03040
Spliceosome
vri04141
Protein processing in endoplasmic reticulum
vri04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117928188
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117928188
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117928188
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117928188
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117928188
03009 Ribosome biogenesis [BR:
vri03009
]
117928188
03110 Chaperones and folding catalysts [BR:
vri03110
]
117928188
04131 Membrane trafficking [BR:
vri04131
]
117928188
03051 Proteasome [BR:
vri03051
]
117928188
03029 Mitochondrial biogenesis [BR:
vri03029
]
117928188
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117928188
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
117928188
Spliceosome [BR:
vri03041
]
Complex B
Other components
Prp19 complex
117928188
Complex C
Prp19-CDC5 complex
117928188
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117928188
Chaperones and folding catalysts [BR:
vri03110
]
Heat shock proteins
HSP70 / DNAK
117928188
Membrane trafficking [BR:
vri04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
117928188
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
117928188
Proteasome [BR:
vri03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
117928188
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
117928188
Exosome [BR:
vri04147
]
Exosomal proteins
Proteins found in most exosomes
117928188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
ParM_N
Motif
Other DBs
NCBI-GeneID:
117928188
NCBI-ProteinID:
XP_034704001
LinkDB
All DBs
Position
13:complement(26538039..26540930)
Genome browser
AA seq
453 aa
AA seq
DB search
MAGNGGAPVIGIDLGTTFSCVGVWQYDRVEIIANDQGNRTTPSYVAFTNTERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRFSDASIQDDIKLWPFKVIGGIGDKPTIVVTYKEEEKKFTA
EEISSMVLSKMRDIAEVYLGLEVDKAVVTVPAYFSDSQRQATRDAGAIAGLDVVRIINEP
TAAAIAYGLDKKGGGGGEKNVLIFDLGGGTFDVSLLKIEEGLFEVRATAGDTHLGGEDFD
NRMVNYFVQEFKRKHKMDISGNPRALERLRTACERAKRTLSSTAQTSIEIDSLYEGVDFY
TTITRARFEDLNMNLFRKCMEPVDKCLRDSKIGKSSVQDVVLVGGSTRIPKVQQMLQDFF
NGKELCKSINPDEAVAYGAAVQGAILSGEGNKKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQDFSTYSDNQTSAAVPVVEEVD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaatggaggggctccggtgatcggaatcgatctcggcacgacgttctcgtgc
gtcggagtgtggcagtacgaccgtgttgaaatcattgcgaatgatcagggcaacagaacg
acgccatcttacgttgctttcactaatacggagcggttgataggagatgctgcaaagaac
caggtcgctatgaaccctgtcaacactgtgtttgatgcaaagcgtctgattggtcggagg
ttcagtgatgcctcaattcaggatgatataaaactctggccgttcaaggtcattggtgga
attggtgacaaacccacaattgtggtcacttacaaagaagaagagaaaaagtttaccgct
gaagagatttcatctatggtcctctcaaagatgcgtgacattgctgaagtctaccttggt
ttagaagtggataaggcagttgtcactgtccctgcttacttcagtgactctcagcgccag
gcaacaagggatgctggggctattgctggtcttgatgtcgtgcgcatcatcaatgaaccc
actgctgctgccattgcctatggccttgacaagaagggagggggtggtggcgagaagaat
gtccttatctttgatcttggaggtggcacttttgatgtctcccttctcaaaatagaggaa
ggtctatttgaagtgagggccactgctggagacacccatcttggaggagaggattttgac
aaccgtatggtgaactattttgtacaggaattcaagaggaagcacaagatggacattagt
ggaaaccccagagcacttgagaggttgagaactgcttgcgaaagagcaaagaggaccctc
tcatccacagctcagacgagcattgagattgactccttatatgaaggtgttgatttctac
acaaccatcactcgtgctagatttgaagatctcaacatgaacctctttagaaagtgcatg
gagcctgtggataagtgtttgagggattctaagataggcaaaagcagtgtccaagatgtt
gtccttgttggtggttctactagaattccaaaggtgcagcaaatgttgcaagacttcttt
aatggaaaggagctttgcaagagcattaacccagatgaagctgttgcttatggcgctgct
gtccagggtgccatcttaagtggagaaggtaataaaaaggtacaggatctgctgctcttg
gatgttactcctctgtcccttgggttggagactgctggaggtgtgatgactgtactgatt
ccgaggaacaccactattccaaccaagaaggagcaggacttttctacctactcagacaac
caaactagtgctgccgtcccagtggttgaggaagttgattaa
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