Vitis riparia (riverbank grape): 117928190
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Entry
117928190 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117928190 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117928190
Membrane trafficking [BR:
vri04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117928190
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117928190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
WD40_Prp19
WD40
Synaptobrevin
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
KNTC1_N
TFIIIC_delta
CPSF_A
Motif
Other DBs
NCBI-GeneID:
117928190
NCBI-ProteinID:
XP_034704002
LinkDB
All DBs
Position
13:28725938..28739358
Genome browser
AA seq
1108 aa
AA seq
DB search
MLAKLFQKSILSPRHHDAERRSVTSADLDPRVVLHYGIPSTASILAVDPIQGLLAVGTLD
GRIKVIGGDNIECLLISPKQLPFKNLEFLRNQGFLVSVSNENEVQVWDLECRHLASNLQW
ESNITAFSVIYGTQYMYVGDEHGSLFVLKYDHQEGKLLHQPYHIPANAVAEVAGISVPIH
HSIVGVLPQPCSHGNRMLIAYENGLLIVWDAFQDSVVCVRGYEDLQVKNKTVVNSPNDMR
HELSNDTSENIPMEKDISSLCWASANGSILAVGYVDGDIILWNLSTDIFTKDQPGNLPDN
AVKLQLSSGSRRLPVIMLYWSEDRSHDDCGGHLFIYGGEAIGSDEVLTILSLDWSSGIEN
LKCVGRLDLTLNGSFADMILLPKSGVPGSSGSTSLFVLTNPGQLHVYDDACLSALMSEHE
KRSHVPAVQYPVVMPTVEPYMTVGKLSLVHGDGKLARAFSETASALKLRVGKTLAMGSRK
WPLTGGLPCKLSFAADNGLERMYIAGYQDGSVRIWDATYPALSLVFAFKSEVKGIEVAGV
GTSVSALDFCSLNLSLAIGNECGLIHLYQLLGSSDDTNLHFVTETEHEVRNLHQENEPQC
TALFSLLNSPVRHLQFSISGARLVVGFECGQVTVLDTNSLSVLFHTSCIAGSSSPLISLA
VKTFSDSPYLINSPKDSELKSSNDTGNGIILFLTKDAHIVVIDGTTGSMISSQLTHPEES
TAISMYIFEGSTSISKVSGEKNTLNSPRNSEAKSEPAKPLEVEPHSPIRARYSEQSLMGL
LVLLCCEDALYLYSLKSVIQGDNVSIQKVNLVKPCRWTTTFKKDEKESGLVLLYQSGDIE
IRSLPELEVVGEYSLMSIIRWNFKANMDKAISSSDRGQIILVNGCEIAFISLLASENDFR
IPECLPCLHNKVLAEDADAAVGFSPNQKKKQDTTSGILGGIIKGFSGGKVEHNVDLTEAQ
KTDLSHLDSIFSRVLFSDPSTFTADSQGVVELSIDDIEIDGPLVVESSSRKSTGDKRDKE
TEREKLFEGSNTDVKPKTRTPAEIIAKYRSAGDASTAAAHARDRLVERQEKLERISQRSE
ELRSGAENFASMASELAKKMENRKWWNK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgaagctcttccaaaaatccattctctcacctcgtcaccatgatgctgaacgg
agaagtgtcacatcggcggacttggatccacgtgttgttcttcattatgggattccatct
actgcgtccattctggccgtcgaccccattcaaggactcttggcagtgggaactctggat
ggtaggataaaagtgataggtggtgataatattgaatgccttctgatttctcccaagcag
ttgccattcaagaacctagagttcctacgcaaccaaggttttctagtcagtgtctcaaat
gaaaatgaagtgcaggtttgggatctggaatgcaggcatcttgcttctaatttacagtgg
gagtccaatataactgctttctctgttatctatggtacacagtacatgtatgttggggat
gaacatggatcattgtttgtgttaaagtatgatcatcaagaaggaaagcttctgcatcag
ccatatcacattcctgcaaatgctgttgctgaagttgcggggatttcagtgcctattcat
cattccattgtaggagtcctcccccaaccatgttctcatgggaatagaatgctgattgca
tatgagaatggcctacttattgtctgggatgcctttcaagattctgttgtttgtgttaga
ggctatgaggatctccaagtgaagaataaaacagtggttaattctccaaatgatatgaga
catgaactttctaatgatacatcagaaaacataccaatggagaaagatataagctctctc
tgttgggcatctgcaaatgggtcaattcttgctgttggctacgtagatggggatattatt
ttatggaacttatcaactgatatatttaccaaagatcagcctggcaatttgcctgataat
gctgttaagctacagctatcttcaggcagcagaagactcccagttattatgctatattgg
tctgaagacagatctcatgatgattgtgggggccacctctttatctatggtggtgaagca
attggatctgacgaagttctcacgatcttgagtcttgattggtcttctgggattgaaaat
ttgaagtgtgttggccgtctagaccttacacttaatggttcttttgcggatatgattctg
ttgcctaagtctggtgtgccagggagtagtggcagtacttcattatttgtattaacaaac
cctgggcaattgcatgtttatgatgatgcttgcttgtccgccttaatgtctgagcatgag
aaaagatcacatgtccctgcagtgcaatatcctgtggttatgcctactgtggaaccatac
atgactgtgggaaagctcagtttggtacatggagatgggaagttagccagggccttttct
gagacagcctcagctttgaagcttcgtgtgggaaaaaccctggctatgggaagtaggaag
tggcctctgactggtggccttccctgcaaactttcctttgctgcagataatgggcttgag
agaatgtatatagcaggttatcaagatggatctgttcgaatttgggatgccacataccca
gccctgtcacttgtttttgctttcaaatccgaggtgaaaggtatcgaagttgctggtgta
ggcacatcagtatcagcattggatttttgctccctcaacttaagcttagccattggcaat
gaatgtggtctgattcatctatatcagctacttgggagttcagatgacacaaatttgcat
tttgtcacagaaactgaacatgaagtccgcaacttgcatcaagagaatgaacctcaatgc
acagctttattttccctccttaattctcctgtacgccacctacaattttcgatttctgga
gctagacttgttgtaggatttgaatgtggccaggtcactgtgcttgacactaattcctta
tcagttttgtttcatacaagctgtatagctggctcaagttctcctctaatttctctcgca
gtaaaaacattttcagatagtccctacttaataaacagtccaaaggactcagaactcaaa
agttcaaatgatactggaaatggaatcatattgtttttgaccaaggatgctcatattgtt
gttatagatgggaccactggtagtatgatcagctctcagttgacacacccagaagagtct
actgcaatttccatgtacatctttgagggcagtacttccatatccaaagtgtctggtgaa
aaaaatacattgaactcacctcgaaattctgaggctaaaagtgaacctgcaaagccattg
gaagttgagccccacagccctattagagccagatattctgagcagagcttaatgggctta
cttgttttactttgttgtgaggatgcgttgtacttgtactctttaaagtctgtgattcag
ggggacaatgtttctattcagaaagtcaaccttgtaaaaccatgtcgttggactacaacc
ttcaagaaagatgagaaagagagtggactggttttactatatcagagtggagatattgaa
ataaggtctttgccagaacttgaagtggtgggagaatactctctaatgtcaattataaga
tggaatttcaaggctaacatggacaaggcaatcagttcttcagataggggacagattatt
ctggtaaatggctgtgaaattgctttcatttctcttttggcctctgaaaatgacttcagg
attccggagtgtttgccttgtctacataataaagtccttgcagaggatgctgatgctgct
gttggcttctcaccaaatcagaagaaaaaacaggatacaacctctgggattttgggtggc
attattaagggtttctcagggggtaaagtggagcacaatgtggatcttactgaagctcag
aaaactgacctctcacatttagacagcatcttttcaagggttctattctcagacccttct
acctttaccgcagacagccaaggagttgtggagctcagcatagatgacattgaaattgat
ggacccttagttgttgaatcttcatctcgcaagagcacgggtgacaagagagacaaggaa
acagagagggaaaaattgtttgaaggttcaaatactgacgtaaaacctaaaacgaggacg
cctgcagagatcatagctaaatatagatctgccggggatgcctctacagcagctgctcat
gcaagagacagacttgtagagcggcaggaaaaacttgagaggatcagccaacgttcagaa
gagctgcggagtggggctgagaactttgcatcaatggcgagcgagctcgcgaagaagatg
gaaaatcgaaaatggtggaacaaataa
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integrated database retrieval system
