Vitis riparia (riverbank grape): 117928314
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Entry
117928314 CDS
T07274
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial-like
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vri03032
]
117928314
03400 DNA repair and recombination proteins [BR:
vri03400
]
117928314
Enzymes [BR:
vri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
117928314
DNA replication proteins [BR:
vri03032
]
Prokaryotic type
DNA Topoisomerases
117928314
DNA repair and recombination proteins [BR:
vri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
117928314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseA_C
DNA_topoisoIV
Syntaxin-18_N
RNAseD_HRDC_C
Motif
Other DBs
NCBI-GeneID:
117928314
NCBI-ProteinID:
XP_034704108
LinkDB
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Position
13:complement(11243003..11268520)
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AA seq
477 aa
AA seq
DB search
MGVPGFSEKSSRMESQGAKEEDKSIMEIVFDLSFWVYLEFGLSERQAEAILDISLRRITR
LEREKFVTESKSLMEQISKLQELLSSRKQILQLIEQEAIELKNRFSTPRRSMLEDTDSGQ
LEDVDVIPNEEMLLAVSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCHAH
DYVLYFSDRGIVYSARAYKIPECTRTAAGTPLVQILCLSDGERITSIIPVSEFAEDQFLL
MLTMNGYIKKVSLNFFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSS
CEIIRALGRNTRGSIAMRLKQGDKMASMDIIPAAIRKDLEKALEDRQSRARNLNGPWLLF
VSESGLGKRVPLSRFRLSPLNRVGLIGYKFSAEDHLAAVFVVGFSLTEDGESDEQVVLVS
QSGTINRIKVRDISIQSRFARGVILMRLEYAGKIQSASLMSATETETDDEEAVAVTQ
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcccggattcagtgagaaatcttctagaatggaaagtcaaggggctaaggaa
gaagataagagcattatggagattgtcttcgatttgtctttttgggtgtatttggagttt
ggtttatctgaaaggcaggctgaagctatattggacataagcctaagaaggatcacacgt
ctggagagagaaaagtttgtaactgaaagtaaatccttgatggaacaaatttcgaagtta
caggaactattgtcaagcaggaaacagatattacagctaatcgaacaagaagcaattgag
ctgaagaacaggttttccactccgaggcgttcaatgttggaggacactgatagtggtcaa
cttgaagatgtggatgttataccaaatgaagaaatgctactggctgttagcgaaaaaggt
tatgtcaagcggatgaaacctaataccttcaatctccaaaatcgtggaacaattggtaaa
tctgttgggaaattgagagtgaatgatgcaatgtcagacttcattgtttgtcatgcacat
gactatgtcctgtatttcagtgataggggaatagtgtactcagctcgtgcatataaaatt
ccagaatgcacccgaactgctgcaggcacaccactggttcagatcttatgtttatctgat
ggtgagagaataacttccataattcctgtgagtgagtttgctgaagatcagtttctactg
atgcttacaatgaatggatacatcaagaaagtatcattgaattttttctcctcaatccga
tcaacaggaatcatagcaattcaattggttcctggtgatgagctcaaatgggtccgttgt
tgtaccaatgatgaccttgtggccatggcttcacagaatggaatggttattttgagctcc
tgtgagattattcgagctctaggaagaaatactagggggtccattgccatgagattgaaa
caaggggataagatggcaagcatggacataataccagcagcaattcggaaagacttggag
aaggcattagaagaccgccagagccgtgctaggaacctcaatggtccatggttactgttt
gtgtctgagagcggtctgggaaagcgggttcctctgagtagatttcgcttgtcacctttg
aatagagttggtttaataggttacaagttttccgcagaagatcacttggcagcagtgttt
gtggttgggttttcactgacagaagatggtgaaagtgatgaacaagtagttctagtgagc
caaagtgggaccattaatagaattaaagttcgggatatttctatacagtcacggtttgca
aggggagtaattctaatgcggctggagtatgctggaaagattcagtcagcttcattaatg
tcagcaacagaaacagagactgatgacgaagaagctgttgctgttacacagtaa
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