Vitis riparia (riverbank grape): 117928344
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Entry
117928344 CDS
T07274
Name
(RefSeq) nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117928344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117928344
Enzymes [BR:
vri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
117928344
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
117928344
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
NTP_transf_2
Glyco_transf_5
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
117928344
NCBI-ProteinID:
XP_034704131
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Position
13:complement(14517853..14537246)
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AA seq
294 aa
AA seq
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MERMDHLQLRQDQQTLILREIQQHLGLLPPAPPVSPVPSEPFAPFDDFDPADNATPVVIL
KDWMKQLTRLRGYTDRMVEDANVVLFTFGSYQLGVHGPRIDIDTLCIGPSYESWEEDFFF
ILHNILAGMEEVTELQPILDAHVLVMKFKFDGISIDLPYASISLLVVPKDLDISDLSVLY
NMDEPTARSLNGCRVADQIPMLVPNVEHFCTILRCLKFWAKRRGVYSNVTGFLGDVVTIL
AWACLSHAHKVDIMLPFYDCIQREQINFGPSTQTVIAYDNTKREVMGFEDFYIL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatggaccacctccagcttcggcaggaccaacagactctcattctccgtgag
attcagcagcacctcggtcttttgccaccagctccacctgtttctcctgtgccctcagag
ccttttgctccatttgatgattttgatccagctgataatgctacacctgtagtgatttta
aaagattggatgaagcagctgacacgtttgagagggtacacagaccggatggtggaggat
gcaaatgttgtgttatttacttttggttcctatcagcttggggtgcatggtcctaggatt
gacatagacactttatgtattgggccatcatatgagagttgggaggaggatttcttcttt
atattgcataatatcttggcaggcatggaagaagttacagaactacagccaattctagat
gcacatgttctagtgatgaaatttaagtttgatggaatatcaattgatcttccttatgcg
agtatctctcttttggttgtgccaaaagacttggacatctctgatttgtctgtactatac
aatatggatgagcccactgctcgaagtcttaatggttgtagagttgcagatcaaatccct
atgcttgttccaaatgttgagcatttttgcacaatactgcgatgtttaaaattttgggct
aaaaggcgtggtgtttattccaatgttactggatttcttggtgatgttgtaactatactg
gcatgggcatgtctatcgcacgcccataaggtggatataatgctacctttctatgactgc
atccagagggagcagatcaattttggtccttctactcagacagtcatcgcgtatgataac
actaagagggaggttatgggttttgaggatttctacatcctttaa
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