KEGG   Vitis riparia (riverbank grape): 117928411
Entry
117928411         CDS       T07274                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RHA1B-like
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vri04121]
    117928411
Ubiquitin system [BR:vri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117928411
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-RING_5 zf-C3HC4_2 zf-RING_UBOX zf-RING_16 zf-ANAPC11 zf-C3HC4_3 Prok-RING_1 zf-RING_6 Rtf2 zf-RING_Vps41 RINGv zf_RING_Vps8_fungal PHD_NSD zf-RING_4 Rad50_zn_hook Prok-RING_4
Other DBs
NCBI-GeneID: 117928411
NCBI-ProteinID: XP_034704192
LinkDB
Position
2:19514739..19515455
AA seq 168 aa
MGFPVGYTELLLPKLLLHTLSLLGFIRKLISYFFRFLGLTDFLEPDIVWTEGSTQVPEFQ
SVSAVLIREILPVMKFEELVGAGAGDPPDQCAVCLYEFEGQEEIRRLTNCRHIFHRSCLD
RWMDCDQKTCPLCRTPFIPDDMQEAFNERLWAASALPDFYGDYSPLGL
NT seq 507 nt   +upstreamnt  +downstreamnt
atgggttttccagtgggttacacggagcttctcctcccgaaacttcttctgcacacgctt
tctcttctgggtttcatcagaaaactcatctcctacttcttccgcttcctgggtctcacc
gattttctggaaccggacattgtgtggacggaggggtcgacccaggtgccggaatttcag
tcggtgtcggcggttctgatccgggagatcctcccggtgatgaagttcgaggagctggtg
ggggccggcgctggagacccgccggaccagtgtgcggtctgtctgtatgagtttgaagga
caggaggagatccgacggctgacgaactgccggcacatatttcaccggagctgcctggac
cgttggatggactgtgatcagaagacgtgtccgctttgtagaactcccttcatccctgat
gatatgcaagaagcattcaatgagaggctttgggctgcctctgctcttcctgatttctat
ggagactactctcctcttggtttatag

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