Vitis riparia (riverbank grape): 117928420
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Entry
117928420 CDS
T07274
Name
(RefSeq) beta-hexosaminidase 1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00511
Other glycan degradation
vri00513
Various types of N-glycan biosynthesis
vri00520
Amino sugar and nucleotide sugar metabolism
vri00531
Glycosaminoglycan degradation
vri00600
Sphingolipid metabolism
vri00603
Glycosphingolipid biosynthesis - globo and isoglobo series
vri00604
Glycosphingolipid biosynthesis - ganglio series
vri01100
Metabolic pathways
vri04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117928420
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117928420
00513 Various types of N-glycan biosynthesis
117928420
00531 Glycosaminoglycan degradation
117928420
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
117928420
00604 Glycosphingolipid biosynthesis - ganglio series
117928420
00511 Other glycan degradation
117928420
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117928420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vri03110
]
117928420
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
117928420
Chaperones and folding catalysts [BR:
vri03110
]
Intramolecular chaperones
Others
117928420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Motif
Other DBs
NCBI-GeneID:
117928420
NCBI-ProteinID:
XP_034704198
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Position
13:complement(26984003..26999332)
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AA seq
541 aa
AA seq
DB search
MAVPYHSSSFVFVFTLICVLGVSLGFNSTSDLDDSLVYLWPLPSDFTFGEDVLAVDPDLS
LAVGGDGGNSDIVREAFLRYRGIIFKHSTRFSKFRGRSMYDISKIRIIVHSDSEVLQLGV
DESYSLLVAKNDDRSIIGEATIEANTVYGALRGLETFSQLCAFDYGTKTVQVYNAPWYIQ
DKPRFVYRGLMLDTSRHYLPIDVIKHVIESMSYAKLNVLHWHIIDEQSFPLEVPTYPKLW
KGAYTKWERYTVEDAYDIVNFAKMRGINIMAEIDIPGHAESWGTGYPDLWPSPSCREPLD
VSKEFTFDMVSGILTDMRKIFPFELFHLGGDEVNTDCWNSTPHVQQWLQDHNMTPKEAYQ
YFVLRAQEIAISKNWAPVNWEETFNTFATNLNPRTVVHNWLGPGVCPKAVAKGFRCIYSN
QGVWYLDHLDVPWDGFYNAEPLEGINSASEQELVLGGEVCMWSEVADTSNVLQTIWPRAA
AAAERLWSKREATSGKNITLTALPRLHYYRCLLTRRGVEADPVTNKYARQPPNGPGSCYE
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcagttccgtaccactcctcctcttttgttttcgtctttacgttaatctgtgtcctg
ggggtttctctcgggttcaattccacttcagacctcgatgactccctcgtctacctctgg
cccctgccctcggacttcacgttcggcgaggacgtccttgccgttgaccccgatctctcg
cttgccgtcggtggcgatggcgggaactccgatattgtcagagaggcgtttctaagatac
agaggaatcatattcaagcacagcactaggttttcgaagttcagggggagatcgatgtat
gatattagcaagattaggattattgttcactccgacagtgaagtgcttcaacttggtgtg
gatgagagttattccttacttgtggcaaaaaacgatgaccgttcaattattggagaggct
acaattgaggcaaatactgtctatggtgctctgcgtggattagagacattcagccaatta
tgtgcatttgattatggaactaaaactgtacaagtgtacaatgcaccatggtacatccaa
gacaaaccaagatttgtatatcgtggtcttatgctagatacctcaaggcactatttaccg
attgatgtaattaaacacgtaattgaatctatgtcatatgctaaacttaatgtcctgcat
tggcacatcattgatgaacagtcatttcctctggaagtacctacgtatccaaaattgtgg
aaaggtgcatatacaaagtgggagcgctacacagttgaggatgcgtatgatattgtcaac
ttcgccaaaatgagaggcatcaatattatggcagaaatagatatccctggtcatgcagaa
tcatggggcacaggatatcctgacctttggccctctccttcctgtagagagcctcttgat
gtttcaaaagagtttactttcgatatggtttctggaattttgacagacatgagaaaaatt
tttccttttgagctcttccatttgggtggtgatgaggtcaatacagattgttggaactct
actcctcatgtgcagcaatggcttcaagatcacaacatgactcctaaagaggcatatcaa
tattttgtactcagagcacaagaaatagcaatttcaaaaaattgggcccctgtcaactgg
gaagaaaccttcaacacatttgcgacaaaccttaatccacggactgtggtacataattgg
ttgggccctggagtttgtccgaaggctgttgcaaagggtttcaggtgcatttacagcaat
caaggagtttggtatcttgaccatcttgatgtcccttgggatggattctataatgcagag
ccactggaaggaataaattctgcttctgaacaagaacttgtgcttggaggagaagtttgc
atgtggagtgaggtagcagatacctcaaacgtcctgcaaacaatatggcctcgagctgca
gcagctgcagagcgcttgtggagcaagagggaagcaacatcagggaaaaatattacctta
actgcattaccgaggttgcattactacagatgcctcttgactaggcgtggggttgaagct
gatccagttacaaataagtatgctcgacagcctccaaatggacccggatcatgctatgag
caataa
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