Vitis riparia (riverbank grape): 117928480
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Entry
117928480 CDS
T07274
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03022
Basal transcription factors
vri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117928480
09124 Replication and repair
03420 Nucleotide excision repair
117928480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117928480
03400 DNA repair and recombination proteins [BR:
vri03400
]
117928480
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117928480
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117928480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
117928480
NCBI-ProteinID:
XP_034704250
LinkDB
All DBs
Position
2:15115423..15120318
Genome browser
AA seq
70 aa
AA seq
DB search
MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF
REQNSYEKPA
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgccactaaaggattgttcatttcatgtgacatacccatggcacaattcatc
atcaacatgaatgcttcaatgccggcatcacagaaatttataatacacgtcctggatagc
actcatctgtttgtgcaacctcatgtggctgaaatgatacgaagtgccatttccgagttt
agagaacagaattcttatgagaagcctgcttga
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