Vitis riparia (riverbank grape): 117928613
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Entry
117928613 CDS
T07274
Name
(RefSeq) pleiotropic drug resistance protein 2-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117928613
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117928613
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117928613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA_18
ABC2_membrane_3
AAA
AAA_33
AAA_28
Rad17
AAA_23
nSTAND3
RsgA_GTPase
ABC_ATPase
RuvB_N
T2SSE
Motif
Other DBs
NCBI-GeneID:
117928613
NCBI-ProteinID:
XP_034704436
LinkDB
All DBs
Position
13:19558630..19566175
Genome browser
AA seq
1479 aa
AA seq
DB search
MAAALAGDDLARSMSSRRKSLASGSRRSWASASILEVLSAQGDVFPSRREDDEEELKWAA
IERLPTFERLRKGMLKQVLDDGKVVHEEVDFTNLGMQERKHLIESILKVVEEDNEKFLLR
LRERTDRVGVEIPKIEVRFEHLSVEGDAYVGTRALPTLLNSTMNLIEGILGLIRLSSSKK
RAVKILKDVSGIVKPSRMTLLLGPPASGKTTLLQALAGKMDKDLRMEGKITYCGHELSEF
VPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYELLAELSRREKESAIKPDPEID
AFMKATAMAGQETSLVTDYVLKMLGLDICADIVVGDDMRRGISGGEKKRVTTGEMLVGPA
KALFMDEISTGLDSSTTFQIVKFMRQMVHIMEVTMIISLLQPAPETYDLFDAIILLCEGQ
IVYQGPRENILEFFESVGFKCPKRKGVADFLQEVTSRKEQEQYWFRHNEPYKYISVPEFV
EHFNSFHIGQKLSDDLGIPYNKSRTHPAALVTEKYGISNWELFKACFAREWLLMKRNSFI
YIFKTTQITIMSVIAMTVFFRTEMKHGQLQDGVKFYGALFYSLINVMFNGMAELALTIFR
LPVFFKQRDFLFYPAWAFALPIWVLRIPLSLMESGIWIILTYYTIGFAPSASRFFRQLLA
FFGVHQMALSLFRFIAALGRTQIVANTLGTFTLLLVFVLGGFIVAKDDIEPWMIWGYYAS
PMTYGQNALVINEFLDDRWSAPNIDQRIPEPTVGKALLKARGMFVDGYWYWICVGALMGF
SLLFNICFIVALTYLDPLGDSKSVIIDEDNEEKSEKQFYSNKPHDLTTPERNSATAPMSE
GIDMEVRKTRESTKSVVKDANHAPTKRGMVLPFQPLSLAFEHVNYYVDMPAGMKSQGIEA
DRLQLLRDASGAFRPGIQIALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQAT
FARISGYCEQNDIHSPNVTVYESLVYSAWLRLAPDVKKETRQVFVEEVMELVELHPLRDA
LVGLPGIHGLSTEQRKRLTVGVELVANPSILFMDEPTTGLDARAAAVVMRTVRNTVDTGR
TVVCTIHQPSIDIFEAFDELLLMKRGGQIIYAGALGRNSHKLVEYFEAVPGVPKIRDGQN
PATWMLEISSAAVEAQLGVDFAEIYAKSELYQRNQELIKELSTPSPGSKDLYFPTKYSQS
FITQCKACFWKQHWSYWRNPPYNAIRFFLTIIIGVLFGVIFWNKGEQTDKEQDLINLLGA
MFSAVFFLGATNTSSVQPVVAIERTVFYRERAAGMYSALPYAFAQVAIEAIYVAIQTLVY
CLLLYSMMGFYWRVDKFLWFYYYLLMCFIYFTLYGMMIVALTPNHQIAAIVMSFFLSFWN
LFSGFLIPRMQIPIWWRWYYWASPVAWTIYGLVTSQVGDKEDPVQVPGAGVKSVKLYLKE
ALGFEYDFLGAVALAHIGWVLLFLFVFAYGIKFLNFQRR
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcattggctggggatgatctagcaaggtccatgagcagcaggcgcaaaagt
ttagcgtctggaagtaggcgaagttgggcttctgcgagtattcttgaggtgttgtcagca
caaggtgatgtttttccgagtaggagagaggatgatgaggaagagttgaagtgggcggcc
attgaaaggcttccaacctttgagcggttgaggaaggggatgcttaagcaagttttggat
gatgggaaggttgtccatgaagaagttgacttcaccaatcttggtatgcaggagaggaag
catctcatagagagtatacttaaggttgttgaagaagataatgagaagttccttctcagg
ctcagggaaaggactgatagggttggggttgagataccaaaaatcgaagtccggtttgag
catttatcagtggaaggagacgcatatgttggaaccagggcacttcctactctgctcaat
tctaccatgaacttaatagagggaatacttggactgattaggctttcctcatccaagaaa
agggcagtcaagatactaaaagatgtgagtgggatcgtgaaaccatcaagaatgactctg
cttctgggacctccagcctcagggaaaactaccctgctgcaggcgcttgctgggaagatg
gacaaagatctaaggatggaaggaaaaatcacatactgtggtcatgaattatcagagttt
gttcctcagagaacatgtgcttacattagccagcatgatctgcaccatggtgagatgaca
gttagggaaacgttggacttctcaggacgatgtttgggagttggaaccagatatgaacta
ctagcagaattgtcaagacgagaaaaagaatctgcaattaagccagatcctgagatagat
gcattcatgaaagcaacagcaatggcaggccaagaaactagtttggttacagattatgtg
ctcaagatgctgggattagatatctgcgctgacattgtggtgggagatgatatgagaagg
ggcatttctggtggagaaaagaagcgtgttactactggagaaatgttggttggaccagca
aaggctcttttcatggatgaaatatcaactggtctggacagttccaccacttttcagatt
gtcaagtttatgaggcagatggttcatatcatggaagtaaccatgataatctctcttctc
caacctgcacctgaaacttatgatctttttgatgccattatcttactatgtgagggtcag
attgtgtaccaaggtccccgtgaaaacatccttgagttctttgaaagcgtgggtttcaaa
tgcccgaaaagaaaaggagttgcagacttcttgcaagaggtgacttccagaaaggaacaa
gaacaatactggttcagacacaatgaaccttacaaatatatctcagtgcccgagtttgta
gaacatttcaactctttccacattggccagaagctttcagacgaccttggaatcccttac
aataagagcagaacccatcctgcagcattggtgacagaaaagtatggaatctccaactgg
gaactcttcaaggcatgctttgccagggagtggctattgatgaagcgcaactcttttata
tacatattcaagacaacccagattacaatcatgtcagtaattgccatgacagtgttcttc
agaacagaaatgaagcatggccaactgcaagatggagtaaaattctatggggctctgttt
tatagtcttataaatgtaatgtttaacggaatggcagagcttgcattgactattttcagg
ctcccagtgttttttaagcagagggatttcttgttttacccggcatgggcttttgcatta
ccaatttgggtccttaggatccccttgtcactcatggagtcagggatatggatcattctc
acgtattacactattgggtttgccccttctgctagtaggtttttccgtcaattactggca
ttctttggcgtgcatcagatggctctatctctcttccgcttcattgcagcacttggaaga
acacagattgtggccaacactcttggtacctttacattgctactggtttttgttctgggt
ggtttcattgtagccaaagatgatattgaaccatggatgatatggggatattatgcttct
ccaatgacgtatggacaaaatgcgcttgtcatcaatgaatttcttgatgacagatggagt
gcgcccaacatcgatcaaagaattccagaacccacagttggaaaagctcttctcaaggca
agaggcatgtttgtggatggctattggtattggatttgtgttggtgcactcatggggttt
tctctgctcttcaatatctgtttcattgtagctctgacatatttggaccctctgggagac
tcaaaatctgtcattattgatgaggataatgaagaaaagagtgagaagcagttttactct
aacaaaccgcatgatctgaccaccccagaaagaaattcagctactgccccaatgtctgaa
ggtattgatatggaagtaaggaaaactcgagaaagcaccaaatcagttgtcaaagatgca
aatcatgcacctactaaaaggggaatggtgttgcccttccagcccttatcacttgcattt
gagcatgtgaattactatgttgatatgcctgctggaatgaagagccaaggaattgaagcg
gatcgtctccaactgctgcgggatgctagtggtgctttcaggccaggtattcaaatagca
ttagttggtgtcagtggtgctggaaagaccactttgatggatgtgttagccggaaggaaa
acaggtggatacattgaaggaagtatcagcatttctggttaccccaaaaaccaagcaact
ttcgctcgtattagtggttactgtgagcagaatgatatacattctccaaatgtaactgtt
tatgaatctcttgtttactctgcctggctgcgccttgctccagatgtcaagaaggaaaca
aggcaggtgtttgttgaggaagtgatggaattggttgagcttcaccccctgagggatgct
ttggttggccttcccggaatacatgggctttcaacagaacagaggaagaggctgacagta
ggtgtagaattggttgctaacccctccatcctcttcatggatgagccaacgacaggcctt
gatgctagagcagccgcagttgttatgcgtactgttagaaacacagtggatacagggcgg
actgttgtctgcaccattcaccagccaagcatagacatctttgaagctttcgatgagcta
ctgctgatgaagagaggaggacaaatcatttatgctggagctcttggtcgcaattctcac
aagcttgtagagtactttgaagctgtcccgggggttcctaaaatcagagatggtcaaaat
cctgctacatggatgctggagatcagctctgctgcagttgaggctcaacttggtgtggat
tttgcagaaatttatgctaaatctgaactctatcagaggaatcaagaactcatcaaagag
ctgagcacaccatcaccaggatccaaagacctttatttccccaccaaatactctcaaagc
tttattactcaatgcaaggcttgcttctggaaacagcactggtcttattggaggaatcct
ccctataatgctatccggttcttcttgaccataattattggtgttctatttggagtaatt
ttctggaacaaaggagagcagacagacaaggaacaagatctaataaatctgctgggagct
atgttttcagctgtcttcttccttggagccaccaacacttcctcagtgcagcctgttgtg
gcaattgagagaacagtcttctaccgtgaaagggcagctgggatgtattcagcattgcct
tacgcatttgcccaggtggccatagaggcaatttacgttgcaatccaaaccttggtttac
tgtcttctcctctactctatgatgggattctactggcgagtggacaagttcttatggttc
tactactacctactcatgtgctttatttacttcacattgtatggaatgatgatcgtagca
ctcactcccaaccatcaaattgctgccattgttatgtcgtttttcctaagcttttggaat
ctcttctctggttttctcatccctaggatgcaaataccaatatggtggaggtggtactac
tgggcttcccctgttgcatggaccatctacggactagtgacatctcaggtgggcgacaag
gaggatccggttcaggtacctggagcaggtgtcaagtcagtgaagctgtatcttaaggag
gctttaggctttgaatatgatttcctgggagcggttgcgttggctcatattggttgggtc
ctcctcttcttgttcgtctttgcctatggcattaagttccttaacttccaaaggaggtaa
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integrated database retrieval system
