Vitis riparia (riverbank grape): 117928649
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Entry
117928649 CDS
T07274
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117928649
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117928649
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117928649
03019 Messenger RNA biogenesis [BR:
vri03019
]
117928649
03041 Spliceosome [BR:
vri03041
]
117928649
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117928649
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
117928649
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117928649
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117928649
Spliceosome [BR:
vri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117928649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
117928649
NCBI-ProteinID:
XP_034704487
LinkDB
All DBs
Position
13:25553591..25560823
Genome browser
AA seq
313 aa
AA seq
DB search
MASHGMDDVVLDDIIRRLLEVRSARPGKQVQLSENEIKQLCVASREIFLQQSNLLELEAP
IKICGDIHGQYSDLLRLFEYGGFPPHTNYLFLGDYVDRGKQSLETICLLLAFKIKYPENF
FLLRGNHECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDDKILCMHGGLSP
DLANLDQIRNLTRPTAIPDSGLLCDLLWSDPGRDVKGWGMNDRGVSFTFGPDKVSEFLTK
HDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMIVDEDLMCSFQILKP
AEKKPKVLMSTKM
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacatgggatggatgatgtcgttctcgacgatataatccgacggctcttggaa
gtccgatcggccaggcccggcaagcaggttcagctctctgagaacgagatcaagcaactc
tgcgttgcatccagggaaatttttcttcagcaatccaatcttctcgaactcgaagcccct
atcaagatttgtggtgatattcatgggcaatacagtgacttgttaaggctttttgaatac
ggggggtttcctcctcacaccaattatctatttttaggggactatgtggatcgtggcaag
caaagcttggaaacaatatgccttttgctcgcctttaagattaaatatccagagaacttc
tttcttttaagaggaaatcatgaatgtgcttctattaatcggatatatggattttatgat
gaatgtaagcgccggtttaacgtgagactttggaaggtttttactgattgttttaactgc
cttccagtggcagctcttatagatgataaaatattgtgcatgcatggtggcctatcccct
gatctggcaaacttggatcaaatcagaaatttaacacgtccaactgctattcctgacagt
ggtttgctttgtgatctactctggtcagatccaggtagagatgttaaaggatgggggatg
aatgacagaggtgtctcatttacctttgggcctgataaagtgtcagaattcttgacaaaa
catgatttagaccttgtttgtcgtgcccatcaggttgtggaggatggatatgaattcttt
gccgataggcaacttgttaccgtattctcagctcccaactactgtggtgaatttgataat
gctggtgcaatgatgattgtagatgaagacttgatgtgctctttccaaattcttaagcca
gcagagaagaaacctaaggttttgatgtccacaaaaatgtga
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