KEGG   Vitis riparia (riverbank grape): 117928658
Entry
117928658         CDS       T07274                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117928658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vri03019]
    117928658
   03016 Transfer RNA biogenesis [BR:vri03016]
    117928658
   03012 Translation factors [BR:vri03012]
    117928658
   04131 Membrane trafficking [BR:vri04131]
    117928658
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vri04147]
    117928658
Messenger RNA biogenesis [BR:vri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     117928658
Transfer RNA biogenesis [BR:vri03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    117928658
Translation factors [BR:vri03012]
 Eukaryotic type
  Elongation factors
   117928658
Membrane trafficking [BR:vri04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    117928658
Exosome [BR:vri04147]
 Exosomal proteins
  Proteins found in most exosomes
   117928658
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 SRPRB GTP_EFTU_D4 FlpD AAA_22
Other DBs
NCBI-GeneID: 117928658
NCBI-ProteinID: XP_034704504
LinkDB
Position
13:complement(24047691..24050767)
AA seq 447 aa
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDMVQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGILKPGMVVTFGPTGLTTEVKSVEMHHESLVEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFISQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEIMTKIDRRSGKELEKEPKFLKNGDAGLVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKNVEKKDPSGAKVTKSAAKKK
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgggtaaggagaaggtccacattaacattgtggtcattggccatgttgattctggcaag
tcaaccacaactggccatctgatctacaagcttggaggaattgacaagcgtgtcattgag
cggtttgaaaaggaggctgctgagatgaataagcggtcatttaagtatgcctgggtgctt
gacaagctcaaggctgagcgggagcgtggtatcactattgacattgcattgtggaagttt
gagaccaccaaatactactgcacagtcattgatgctcccggacatcgtgacttcatcaag
aatatgattactggaacctcccaagctgactgtgctgtccttatcattgactctactact
ggaggctttgaagctggcatttccaaggatgggcagactcgtgagcatgctctccttgct
ttcacccttggtgtcaggcagatgatctgctgctgcaacaagatggatgctacaacccct
aagtactcaaaggcgagatatgatgaaattgttaaggaagtctcttcctacttgaagaag
gttggctacaaccccgacaagattccttttgttcccatctctggttttgaaggagacaac
atgatagagaggtcaaccaaccttgactggtacaagggcccaacccttcttgaggccctt
gacatggttcaagagccaaagagaccctcagacaagcccctccgtctcccacttcaggat
gtctacaagattggtggcattggcactgtcccagtgggacgggttgagactggtatcctc
aagcctggtatggttgtgacttttggtcccactggactgaccactgaagtaaagtcagtg
gagatgcaccatgagtctcttgtggaggctcttcctggtgacaatgttgggttcaatgtg
aagaatgtggctgtcaaggatctcaagcgtggctttgttgcatcaaactccaaggatgat
cctgccaaggaggcagcaaacttcatatcccaggttattatcatgaaccaccctggccag
attggcaatggctatgcccctgttctggattgccacacatcccatattgctgtcaagttt
gctgagatcatgaccaagattgacagacggtctggtaaggaacttgagaaggagcccaag
ttcttgaagaatggtgatgcaggtttggttaagatgattcccaccaagcccatggtggtt
gagaccttctctgagtatccccctctagggcgttttgctgtgagggacatgcgtcagaca
gtggctgttggagtcatcaagaacgtggaaaagaaggatccttcgggagccaaggtcaca
aagtctgctgccaagaagaagtga

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