Vitis riparia (riverbank grape): 117928700
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Entry
117928700 CDS
T07274
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117928700
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
117928700
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
TPR_GEMI5
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
PhyR_sigma2
PAH_ZNF598
Beta-prop_HPS5
tRNA_Me_trans_M
Motif
Other DBs
NCBI-GeneID:
117928700
NCBI-ProteinID:
XP_034704574
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Position
13:26676911..26686733
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AA seq
1316 aa
AA seq
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MNNLKLYSDLSLNLELRSAEEVVSFSAFDIERNRLFFASSDNFIYTTQLPSSQNERVWGK
TSSYSKVEPIDLEPGDFITAFDYLMEKEALIVGTSSGLLLLHNVDDNVIEVVGRVEGGVK
CLSPSPDGDLLGIITGFGQIVVMTHDWDVLYENTLDDLPEDVDLSEPTFSSCYISWRGDG
KYFVTLGELHTSSSHKKLKVWERDTGTLHAASESKAFMGTVLDWMPSGAKIASVYDKKVE
NKCPLIVFFERNGLERSSFSINELTDAKVEILKWNCSSDLLAAVVRSETFDSVKIWFFSN
NHWYLKQEIRYSREDGVKFMWHPTKPLQLICWTLGGEVTVNSFVWVTAVMENSTALVIDE
SKILATPLSLSLMPPPMYLFNLKFSSTIRDIAFYTKNSKNLLAAFLSDGCLCVAELPPLD
TWEELEGKELSVDASSSETIFGSFVHLIWLDAHILLGVSHFGFSHSNYFSQTPSSKDMLH
GYYLQEIELLCSEDHVPGLGTCSGWHAKITNQIPLDGLVIGLAPNPTKKCSAFVQFDGGK
VFEYIPNLGIMGGAPKTEDMSLSSSCPWMSVVPVGDSGSSRPLLFGLDDNGRLHVGGKII
CNNCRSFSFYSNSADLAITHLILATKQDLLFVIDIDDILDGKLEVKYENFIHAGNKRREE
DNRNFITIWERGAKVIGVLHGDEAAVILQTARGNLECIYPRKLVLASIINALVQSRFRDG
LLMVRRHRIDFNVIVDHCGWQAFLQSAAEFVRQVNNLSYITEFVCSIKNETITETLYKNY
ISLLCPREAKDVQAGDFKGSNNNNKVSSVLMSIRKALEELVPESPARELCILTTLARSDP
PALEEALERIKLIREMELLGSDDPRRKSYPSAEEALKHLLWLSDSEAVYEASLGLYDLHL
AAIVALNSQRDPKEFLPFLQELERMPVHLMRYNIDIRLRRYESALKHIASAGDAYYADCL
NLMKENPQLFPLGLQLITDPAKKKEVLEAWGDHFSDEKCFEDAATTYLCCSGLEKALKAY
RACGNWSGVMTVAGLLKLGKEEIVQLAHELCEELQALGKPGEAAKIALDYCGDVKSAINL
LVSARDWEEALRVAFMHRCDDLISEVQNASLECATLLIGEYEEGLEKVGKYLARYLAVRQ
RRLLLAAKLQSEDRSINDLDDDTASEASSSFSGMSAYTTGTRKGSAASISSSTASKGRGM
RRQRNRGKIRAGSPGEEMALVEHLKGMYLTPGAERELKSLLVSLVILGKEEMAKKLQRTG
EAFQLSQMAAVKLAEDTMPNDNIDEYAHTLENYIQKLRNEQQSDAFVWRSKVLLSS
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctgaagctttattcagatctctctctgaatctggagttgagatcagccgaa
gaagttgtctctttctctgcgttcgatattgaacgcaaccgcttgttttttgcttcttcc
gataatttcatatacaccacgcagcttccttcatcacaaaatgaaagggtatggggcaaa
acctcttcatattctaaggttgagcctattgatttggaacctggggacttcattactgcc
tttgattatctcatggagaaagaagcacttatagtgggaacttctagtgggcttcttttg
ctgcataatgtggatgataatgtgatagaagttgttggtagggtggagggtggtgtcaag
tgcctttcgccaagcccagatggagatctacttggtataataactggttttgggcagata
gtagtgatgactcatgattgggatgtgttgtatgagaatacgcttgatgatctgcctgaa
gatgttgacttaagtgaaccaaccttttcttcctgttatatttcttggcgtggtgatggg
aaatactttgtgactctgggggaattgcacacttcttcctcacacaagaagcttaaggtt
tgggaaagagatacaggaacgctgcatgctgcttcagaatcaaaggctttcatgggaaca
gttttggattggatgcctagtggagctaaaattgcttctgtttatgacaagaaagttgaa
aataagtgtcccttaatagttttctttgagaggaatggattggaaagaagctcttttagc
attaatgagctaactgatgcaaaagtagaaattttaaagtggaattgcagttcagatctt
cttgcagctgttgttagatctgaaacatttgactctgttaaaatatggttcttcagcaat
aatcattggtacctgaaacaagaaattagatactcgagggaggatggagttaaattcatg
tggcatccgacaaagccactgcagctgatttgttggactcttggtggcgaagtcacagtc
aacagctttgtctgggttacagctgttatggagaactcaacagcattagtaattgatgag
tccaagatactagcaacccctctttccctttctctaatgccaccaccgatgtatttattt
aacctaaagttttcaagtactattagggacattgctttttataccaagaattctaagaat
cttttggctgcatttttgtcagatggatgtttgtgtgttgcagagcttcctcctcttgat
acttgggaagaacttgaagggaaagaattaagtgttgatgcctcctcttctgaaacaata
tttgggtcatttgtacatctcatatggttggatgcacatatacttcttggtgtttctcat
tttgggttcagtcatagcaattacttttcacaaactccatctagcaaggatatgcttcat
gggtattatttgcaggaaattgagcttttgtgttctgaggatcatgtcccaggtttggga
acctgctcaggttggcatgcaaagatcaccaatcaaatacctctagatgggcttgtaatt
ggccttgctcctaatcccacaaaaaagtgttcagcatttgttcagtttgatggtggcaaa
gtctttgaatatataccaaatttaggcatcatgggaggagctccaaaaactgaggatatg
agtttgtcatcatcttgcccttggatgagtgtagttcctgtgggtgacagtggatcatca
aggcctttgctttttgggcttgatgacaatggtaggctgcatgttggtgggaagataata
tgtaacaactgcagaagtttctcattttactcaaattcggctgatctagcgataacacat
ttgattcttgcaactaaacaggatttactctttgttattgacattgacgacattttggat
ggaaaattggaagtaaaatatgaaaacttcatccatgctggtaataaaagacgcgaagaa
gataatagaaattttataactatatgggaaagaggtgctaaagttattggtgtccttcat
ggagatgaagctgctgttatattacaaacagctcgaggaaacctagaatgcatctatcca
agaaaattggtcctggcctcaataattaatgctttggttcaaagtcgtttcagagatggg
ctactcatggtgaggcggcataggatagatttcaatgtcattgtcgaccattgtggttgg
caagcctttctccagtcagctgcagagtttgtcaggcaggtaaataatctgagctacatc
actgagtttgtttgttccatcaagaatgagactattacagagactttatacaaaaattat
atatccctactgtgcccgagggaggctaaagatgtccaagctggagatttcaagggttca
aataataataacaaagtttcttcagttctgatgtctataaggaaggctcttgaggaacta
gtaccggaaagtcctgcaagggagctttgcattctgactactctagctcgaagtgatccc
ccagctcttgaagaagcattggagagaataaaacttatccgggaaatggaactattaggt
tctgatgatccacgtagaaagtcttacccttctgcagaagaagctctgaagcatcttttg
tggttgtctgattctgaggcggtctatgaagcttctttaggcctttatgatttgcacctt
gcagctattgtggcattgaactctcaacgggacccaaaagaatttcttccctttcttcaa
gaactggaacgcatgcctgttcacttgatgcgatataatattgacattagattgcgcagg
tatgagagtgctctcaaacacatcgcttctgcaggggatgcttattatgcagattgtttg
aacctcatgaaggaaaatccccaactttttccattgggacttcaactgatcactgatcct
gccaagaaaaaagaagtgcttgaggcctggggagatcattttagtgatgaaaaatgcttt
gaagatgctgctactacttatttgtgctgctctggtttggagaaagctttgaaggcatat
cgtgcatgtggtaattggagtggtgtaatgacggttgctggtctccttaaattgggaaaa
gaagagattgtgcaactggcacatgagctttgtgaagaactccaggcacttggtaaacca
ggggaagctgccaaaattgctctggattactgtggagatgttaaaagtgctatcaattta
ttggtcagtgcgcgagattgggaggaggcactaagggttgcgtttatgcacaggtgtgat
gatttaatctcagaagtgcagaatgcatctctggaatgtgccactctgctcattggtgaa
tatgaggaaggtctggagaaagtaggaaagtacttagcccgctacttagctgttcggcag
agaagattactacttgcagcaaagcttcaatcagaagaccggtcgataaatgatcttgat
gatgatactgcttcagaagctagcagtagtttcagtggaatgagtgcttacaccacaggg
acaaggaaaggctctgctgcttccattagttcaagtacggcaagcaagggaagaggaatg
aggcgtcaaaggaatagaggaaaaatccgtgctggaagccctggtgaggagatggctctg
gtagagcatttgaagggcatgtatcttacccctggagcagagcgtgaacttaaatctctg
ttggtttcccttgtgatacttggcaaggaagaaatggcgaagaagctacaacgaacagga
gaggcctttcaactgtctcaaatggcagcagtcaaactagctgaagatacaatgcctaat
gacaacatagatgagtatgcacatactttggagaactacatacagaaattaagaaatgaa
cagcagtcagatgcttttgtttggcggtctaaagtgctgctttcttcataa
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