Vitis riparia (riverbank grape): 117928718
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Entry
117928718 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: transketolase, chloroplastic-like
KO
K00615
transketolase [EC:
2.2.1.1
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00030
Pentose phosphate pathway
vri00710
Carbon fixation by Calvin cycle
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
vri01200
Carbon metabolism
vri01230
Biosynthesis of amino acids
Module
vri_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
vri_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
vri_M00165
Reductive pentose phosphate cycle (Calvin cycle)
vri_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
117928718
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
117928718
09109 Metabolism of terpenoids and polyketides
01051 Biosynthesis of ansamycins
117928718
Enzymes [BR:
vri01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.1 transketolase
117928718
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Gene cluster
GFIT
Motif
Pfam:
Transketolase_N
Transket_pyr
Transketolase_C_1
Transketolase_C
E1_dh
TPP_enzyme_C
DXP_synthase_N
ThiN
Motif
Other DBs
NCBI-GeneID:
117928718
NCBI-ProteinID:
XP_034704602
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Position
13:complement(23199533..23203324)
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AA seq
770 aa
AA seq
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AANTTVSFPGKTNPLIAIISSLLFQPLSVPTPTVQNSRNHRFRIGLTPPPRNSLRANHAP
IGKPANLCKDYKLSWLQELKHAFQPQLSNQNLDADDEEDNEFFQELVDMRCVDNVRMLIV
DAVQTAKSGHSGMPLGMAEVGYILYRHVMRYNPRNPKWFNRDRFVLSTGHGCLLQYICLH
LAGFQSVQLEDLQRLCKLGSRTPGHPENVVTDGIEVTTGPLGQGVANAVGLALAEAHSAA
RFNKPDAVIVDHRTFCIMGDGCVMEGISHEAASLAAHWKLNKLTLIYDDNLNTIDGATSL
AFSEDISARFKALGWNTITVDDTHNDMEAIKNALLSAFRETEKPTFIRVCRLIGKLSEKK
GTSKAHHGTFDEKDVKKMRRKVNWSDREPFHVIPMIYREMQIQTEYGEXEWHSRLCYYQT
KYPQEFVEFKILLDGGLLPGWESSLPKFPTSDPVDATQGYSEKCLNQLAKVLPGLIRGSA
DLATSNKAYLHGHEDFSQPNSPWGCNIRYGVREHAMAGISYGIALHGSGLXPFAATFLVF
SDYLKNSIRLSALSHAGVIYIMTHDXIGLGEDGPTHRPAVEQLAGLRAVPQLLVFRPADG
NETAGAYKVAVANRNVPSLIALSRQKVAANLEGTSRASVERGGYIVSDNSEDKLPDIILI
GTGSELCLCYESAKMLRQEGRTVRLVSLVCWRLFDMQPQQYKEFVLPPSVSKRVSVEAAS
PIGWREYVGEEGVVVGVEEFGASGAYLDTFKKFGFTEGNITRIAKSLLSQ
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
gccgccaacacaaccgtctctttccccggaaaaaccaatccccttatagccatcatttcc
tctcttctcttccaacctctctctgtccccacacccacagtccagaacagcagaaatcac
agattcagaattgggttgacacccccaccacgtaatagtctcagagccaaccatgctccc
ataggcaaacccgccaacctctgcaaagactacaagctctcctggctacaagagctcaaa
catgcattccaaccccaactatccaaccaaaacttggacgcagatgatgaagaagacaac
gaattcttccaggaattagttgacatgcgatgcgtggataatgttaggatgctgatcgtg
gatgcagtgcaaaccgccaagtctgggcactcgggaatgcctcttggcatggccgaagtt
gggtatattctgtacaggcatgtgatgaggtacaaccccagaaatcctaaatggtttaac
agggacaggtttgttttgagcactggccatggatgcctcctccagtatatctgtcttcat
cttgctggatttcaatcagttcaactggaagacctgcaaaggctttgcaagcttggtagt
aggaccccaggtcaccctgagaatgtggttaccgatggcattgaagtcactacaggcccc
cttgggcaaggtgtagctaacgcagttggccttgccctggcagaagctcattctgctgct
agattcaacaaacccgatgctgtcattgttgatcacaggacattctgcatcatgggtgat
ggatgtgtcatggaagggatatcacatgaagctgcatctttggctgcacattggaaactc
aacaagcttacactaatttatgatgataaccttaataccattgatggagccacctcccta
gctttttctgaagatatatcggcacgatttaaggctcttgggtggaacacaatcacagtg
gatgatacacacaatgacatggaagccatcaagaatgcccttctctctgcttttagggaa
acagagaaaccaactttcataagggtttgtagactgataggtaaattgtctgaaaagaaa
ggaacttccaaagctcatcatggtacttttgatgaaaaggatgtgaagaaaatgagacgg
aaagttaactggagtgatcgagaaccattccatgtcattcctatgatctatagggaaatg
cagatacaaacagagtatggggaannagaatggcattcaaggctatgttattaccagacc
aaatatccacaagagtttgtagaattcaagattctccttgatggtggtttgcttcctggc
tgggaaagctcattaccgaagtttcctacatcggatccggtggatgccactcaagggtac
tctgagaagtgcttaaaccagcttgctaaagtgctcccggggttgatccgtggtagtgca
gaccttgcaacctccaacaaagcttacctccacggccatgaagacttcagccagcctaac
tccccatggggctgcaacattcgctatggggttagagagcatgcaatggctggaatttca
tatggtattgcattgcatggaagtggcttgnatccatttgcagccactttcctcgttttc
tccgactacctgaagaactccattagactttctgctctaagccatgctggggtcatctac
atcatgacccatgacnntattggtctgggggaagatggaccaacacaccgacctgcagtg
gaacagcttgctggcctacgggcagtgccacagctcctagttttccggcctgcagatggg
aatgagactgctggagcatacaaagtggctgttgccaatcgcaatgtaccaagcctcatt
gcattatcaaggcaaaaggtggctgcaaatttggaaggaacatcaagagcttcagttgaa
agaggtggttacattgtgagtgataattctgaagacaagttgccagacataatactgatt
ggcaccggatcagaactgtgcctctgctatgagagtgccaaaatgctgagacaagaaggg
aggacagtgaggttggtttccctcgtctgctggcggctctttgacatgcagccacaacag
tataaggagtttgtcttgccaccaagcgtgtcaaagcgggtaagcgtcgaggcagcctcc
cccatcgggtggagggagtatgtgggagaggaaggagtggtggttggggtggaggagttt
ggtgccagtggggcttatttggatactttcaagaagtttggtttcactgaaggaaacata
acaaggattgcaaagtcattgctatctcaataa
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