Vitis riparia (riverbank grape): 117928754
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Entry
117928754 CDS
T07274
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117928754
Enzymes [BR:
vri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
117928754
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117928754
NCBI-ProteinID:
XP_034704649
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Position
13:complement(22437790..22442795)
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AA seq
495 aa
AA seq
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MLPNTCILLLCLLCSLSPLIRATLNLNLTLPHQHPNPEVVVDEVQRRLNVSISRRQVLSV
QENDGSSCLTGNPVDDCWRCDPNWQNNRQRLADCGIGFGQDAMGGKGGQFYVVTDSSDED
PINPAPGTLRHAVIQTQPLWITFSTNMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTL
QYVSNVIIHGVHVHHCVPSGNADIRSSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYC
RDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDKYSPDSGMQVTIAFNHFGEGLVQRMP
RCRRGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYTAPGDINAKEVTKRVETDEEDWA
EWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIQQLTMNAGALSGPRDDTV
GVSYPGFSSGGTSSSISNNGGHGSSDDYFGMIFGSGSGSDAPPPPSVTISMFFSLLIILI
LYVTTNHGDVLLLFL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctaatacctgcattctgctattatgcctcctctgctctctctcccctcttatc
agagccactctcaacctcaatctcactctcccccatcagcaccccaaccctgaagttgtt
gttgacgaagttcaaaggagactcaatgtatccatatcgagaagacaagtgctctctgta
caggaaaacgatgggtcgtcgtgtctcaccggtaaccccgttgacgactgctggcggtgc
gaccccaactggcaaaacaaccggcagcgcctcgccgactgcggcattgggttcggccaa
gacgctatgggcggcaagggcggtcagttctatgtggtcaccgactcctccgacgaggac
cccatcaaccccgctccgggcactctccggcacgctgtgatccagactcaacccctgtgg
attaccttctccaccaacatgctcatcaaactcaagtacgagctcatcgtcaacagcttc
aagaccatagacgggcgcggagccaatgtgcacatcaccggcaggggctgcatgaccctg
cagtacgtgagcaacgtcatcatccacggcgtccacgttcaccactgcgtgccctccggg
aacgccgacatccgatcatcccccacacacgtgggatggcgtgggaaatcggacggcgac
ggaatctccatatttgggtcgaggaagatctggatcgaccattgctcgctgtcatactgt
agggatggattgattgatgcaataatgggttcgaccgggatcaccatatcgaacaactac
ttctcccatcatgacgaggtgatgcttttagggcacgacgacaagtactcgccggactcc
gggatgcaggtgacaatagccttcaaccacttcggtgaggggctggtgcagcgtatgcct
cgctgccggcgtggctacatccacgtggtcaacaacgacttcacccaatgggagatgtat
gccatcggcggcagcgccaaccccaccatcaacagccagggtaatcgctatactgcgcct
ggggacattaacgccaaggaggtgacaaagcgcgtggagacagacgaggaggattgggca
gaatggaactggaggacagagggggacgtaatggtaaatggagctttctttgtgccatca
ggggtagggctgagcactcagtacgccaaggcttccagtgtggagcccaagtccgccgct
ctcattcagcagctcaccatgaacgccggcgccctcagtggccccagggatgacaccgtg
ggcgtatcctatccgggattcagcagtggtgggaccagcagcagcataagcaacaatggt
ggtcacgggtccagcgatgattactttgggatgatattcgggagtgggagcgggagcgac
gcaccaccgccaccctcagttacaatctctatgtttttttctcttttaattatcttaatt
ttgtacgttaccaccaaccatggtgatgtattattattatttctctaa
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