Vitis riparia (riverbank grape): 117928773
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Entry
117928773 CDS
T07274
Name
(RefSeq) U-box domain-containing protein 14
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117928773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117928773
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117928773
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
U-box type E3
117928773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
ARMC9_ARM
zf-Nse
HEAT_EZ
zf-C3HC4_4
Arm_2
KAP
Cnd1
zf-C3HC4_2
TOR1L1_N
MCAfunc
MLKL_N
zf-C3HC4
zf-RING_2
zf-NOSIP
zf-rbx1
DUF1307
Motif
Other DBs
NCBI-GeneID:
117928773
NCBI-ProteinID:
XP_034704672
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Position
13:complement(22710279..22714426)
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AA seq
628 aa
AA seq
DB search
MSPTKDSNKISVLNQLLAIVKEISGLPECRNTTKKMYYNLVRRVKLLSPLFEELKDSEEE
LEDSEIRAFVLLRVALDSAMDLLKLVNEGSKLYQALQRDKIADKFCQMTDQIEASLSSIP
YDKLNVSEEVQEQIELVHAQFKRAKGRTDSPDLQLDRDLEIAQKEKDPDPEVLRRLSENL
QLRTINDLKKESLALHEMVISSSVDPGDCFAKMSSLLRKLKDYVLTINPEADTSEGEKGL
IKHRSPVIPDDFRCPISLELMRDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTA
LTPNYVLKSLIALWCESNGIELPKNQDNCRNKKTGKFVSDCDRPAIHALLQKLLDGNPEI
QRAAAGELRLLAKRNADNRVCIAEAGAIPRLVELLSSTDPRTQEHAVTALLNLSINEANK
GSIVNSGAIPDIVDVLKTGSMEARENAAATLFSLSVIDENKVIIGAAGAIPALIDLLCQG
TPRGKKDAATAIFNLAIYQGNKVRAVRAGIVVPLMRFLKDAGGGMVDEALAILAILASHQ
EGKLAIGQAEPFPVLVEVIKTGSPRNRENAAAVLWSLCTGDAQHLKIARELGAEEALKEL
SENGTDRAKRKAGNILELLQRVEVVVDP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgacgaaggattcgaataaaatatcagtactgaatcaactacttgcgatcgtg
aaggagatttctggattacccgagtgtagaaacaccaccaagaagatgtattataatttg
gtgaggagggtcaagcttttgagtcctctgtttgaggaattgaaggacagcgaagaggag
ctcgaggacagcgagattcgagcctttgtgttgctgagagttgctctcgattccgctatg
gaccttctcaaattggtcaacgaagggagtaagctttatcaggctctgcaaagggacaaa
attgcagataagttttgccaaatgacagatcaaattgaagcatcgttgagcagtattcct
tatgataaactcaatgtatcagaggaagttcaagaacagattgagcttgttcatgctcaa
ttcaaaagagcgaaaggaagaacggactcacccgatttacaactagatagggatttagaa
atagcacagaaagaaaaagaccctgatcctgaagttctaagaagactatccgaaaacctg
caactcaggactatcaatgatttgaagaaagaatctctggctttgcatgaaatggttatc
tcaagttctgtagatccaggggactgctttgcaaagatgtcatctctgcttagaaagctc
aaggattatgtattaacaataaaccctgaagcagacacatcagagggtgaaaagggcttg
atcaagcacagatctcctgttatcccagatgatttccggtgcccaatctctcttgaactg
atgagagatcctgttatagtctctactggacagacatatgaaagatcctgcattcaaaaa
tggttggatgcagggcacaagacctgtcctaagacgcagcagactctgttgcacactgcc
ttaacacccaactatgttttgaagagtttaattgctttatggtgtgagagcaatggcatt
gagctcccaaaaaatcaagataattgtagaaacaagaagaccggaaaatttgtttcagac
tgtgatcgacccgctattcatgccttattgcagaaactacttgacgggaatccagaaata
caaagagcagcagctggtgagctccggttgctggcaaagaggaatgcagataacagagta
tgcattgctgaggcaggagccattcctcggcttgtagaactactatcctccacagatccc
cggacccaagagcatgctgttacagcacttctcaacctctccataaatgaggctaacaag
ggaagtattgtaaattcaggagctattccagatatagtggacgttctaaaaactggcagc
atggaggcaagagaaaatgctgctgcaacccttttcagtttatcagtcatagatgagaac
aaggtgataataggagcggctggggctatcccagctcttattgatctgctttgtcaggga
accccaagaggaaagaaggatgctgccactgctatttttaaccttgctatctatcaggga
aacaaggtgagggctgtaagggcagggattgtggtgccactgatgagattcctgaaggat
gctgggggtggaatggtggatgaagcactggcaatactggctattcttgccagccatcaa
gagggaaaattggctattggccaggctgagcccttccctgttttggtggaagtgataaag
acaggttcgcctcgtaatagggagaatgctgcagccgttttgtggtcgttgtgtacaggt
gatgcacagcatttgaaaatagcaagagagcttggggcagaagaagcattgaaggagctt
tcagagaatggcactgatagggccaagagaaaagctgggaatattttagagctccttcaa
cgagttgaagtcgtggtcgacccctaa
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