Vitis riparia (riverbank grape): 117928871
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Entry
117928871 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117928871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117928871
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117928871
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117928871
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
zf-RING_UBOX
zf-Di19
Motif
Other DBs
NCBI-GeneID:
117928871
NCBI-ProteinID:
XP_034704834
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Position
13:complement(4940578..4948795)
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AA seq
338 aa
AA seq
DB search
MLLSNWLASSKRKKTRSKGGKCDLESKQQAILVMASGNTYFDDMRSKSEVIDPPQSEDMM
EVSEHVNDPAQTTLKPNVTVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHN
RCPTCRHELGNIRCLALEKVAASLELPCKYQSFGCLGIYPYYSKLKHESQCVYRPYNCPY
AGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFNHRYVKSNPHEVENATWMLTVFSCFGQY
FCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGTGRKMIWQGVPRSIRDSHRK
VRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctgttaagtaattggttggcatcttctaagagaaagaagactagaagcaagggtgga
aagtgtgatttggagagtaagcagcaggccatacttgtaatggcatctgggaatacatat
tttgatgacatgcggagcaaatctgaggttattgatcctcctcaaagtgaagatatgatg
gaagtcagtgaacatgtgaatgatccagctcaaactactctgaaacctaacgtgaccgtc
tctagtagtgtgcgggagctattagagtgtcctgtgtgcttaaatgctatgtaccctccc
atccatcagtgttcaaatggtcacacattgtgttctggatgcaaacctagggtgcataac
cgatgtcccacttgcaggcatgaacttggcaatatcagatgtcttgccttggagaaggta
gctgcgtcccttgaacttccatgtaaatatcagagttttgggtgcttgggcatatatcct
tattacagcaagctaaagcatgaatctcagtgtgtctatagaccctataactgcccctat
gctggatcagaatgcacagtcattggtgacattccttatctggtggcccacctaaaagat
gatcataaagttgacatgcacaatggcagtactttcaaccatcgctatgttaaatcaaat
cctcatgaagttgaaaatgctacttggatgctaacggttttcagttgctttggtcagtac
ttctgtctgcattttgaagccttccagcttggaatggcgccagtctatatagcattcttg
aggttcatgggtgatgacaatgaggcaaagaactacagttacagtctagaggtgggaggg
actggcaggaagatgatttggcaaggggtgcccagaagcataagggacagccacagaaag
gttcgtgacagttttgatggactcatcatccagcgcaacatggctctcttcttctcagga
ggtgatcggaaggaattgaagttaagagtgactggtaggatttggaaggaacagtga
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