Vitis riparia (riverbank grape): 117928999
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Entry
117928999 CDS
T07274
Name
(RefSeq) autophagy-related protein 18c
KO
K22991
WD repeat-containing protein 45
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117928999
Membrane trafficking [BR:
vri04131
]
Autophagy
Other autophagy associated proteins
Others
117928999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_2nd
BCAS3_WD40
WDR55
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_IFT80_2nd
RMC1_N
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
117928999
NCBI-ProteinID:
XP_034705065
LinkDB
All DBs
Position
13:29357341..29362422
Genome browser
AA seq
417 aa
AA seq
DB search
MTVPSSTMSSSVSTSRGMLPSARLDAHGSNSGTPGSFGQSVPEFNDTDETGLLSVSWNQD
HGCFAAGTTHGFRIYSCDPFKEIFRRDLKSGGFGIVEMLFRSNILALVGAGTNSQYPPSK
VIIWDDYERRCIGEFSFRSDVRAVKLRRDRIVVVVEHKIYVYNFTDLKLLQQIETLANPR
GLCCLSHHSNTFVLACPGLQRGLVRIEHFGLNMTKLIKAHDSHVACLTLTMDGLLLASAS
TKGTLIRIFNTMDGTRLQEVRRGSDNAEIYSIALSPNVQWLAVSSEKGTVHIFNLRVRVV
GEDSSNHSITAQGPAPFYRNSSNSLDALISPNAGANPGSSLSFMKGFLPKYFSSEWSFAQ
FRVPEDTQFIATFGSQNTVIIVGMDGSFYRCSFDHLNGGEMLQQEYHSFLKKGHLES
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgactgttccctcatccaccatgagttctagtgtttcaacatctcgaggaatgcttcca
tcagcaaggcttgatgcccatggatcaaattctgggactcctggttcttttggccaatcg
gtaccggagttcaatgacactgatgaaacaggtctgctctctgtatcctggaatcaggac
catggttgctttgctgctggcacaacccacgggtttcgtatttatagttgtgatcctttc
aaggaaattttcagacgtgatttgaaaagtgggggatttgggattgttgagatgctgttt
cgttccaacattctagcactagttggtgctggaactaattcccagtaccctccaagcaaa
gttataatctgggatgattatgagaggcgatgtattggtgaattttcatttagatctgat
gttcgtgcagtgaaattaagacgtgatcgcattgttgttgttgttgagcacaagatatat
gtttacaattttacagatctgaagcttcttcagcagatagagactctggcaaatcccagg
ggactttgttgcctttctcaccattcgaatacatttgtgttggcttgccctggtcttcaa
agaggactggttcggattgaacactttgggctgaatatgacaaagttaattaaggctcat
gattctcatgttgcatgcctcactttgacaatggacgggcttcttcttgcatctgctagt
acgaaaggcactttgatacgaattttcaacacaatggatgggactcgcttacaagaggtg
cgtaggggttcagacaacgcggaaatttatagtattgctctctctccgaatgttcagtgg
ttggctgtgtcaagtgaaaaaggtaccgttcatatattcaatctcagagttcgagtggta
ggggaggattcatcaaatcattctatcactgcgcaaggtccagcaccgttttaccgtaat
tcttcaaattcccttgatgcccttatttctcccaatgctggtgccaaccctggttcatca
ttgtcctttatgaaagggtttttaccaaaatattttagctcagaatggtcatttgcacaa
ttccgtgtacctgaagacactcaattcattgcaacatttggatctcagaacactgtcatt
attgttggcatggacgggagtttctacaggtgcagttttgatcacttgaatggaggggag
atgttgcaacaggaataccacagctttctaaagaagggtcatcttgaatcttga
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integrated database retrieval system
