Vitis riparia (riverbank grape): 117929024
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Entry
117929024 CDS
T07274
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03440
Homologous recombination
vri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117929024
03460 Fanconi anemia pathway
117929024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117929024
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117929024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
DUF6429
Motif
Other DBs
NCBI-GeneID:
117929024
NCBI-ProteinID:
XP_034705101
LinkDB
All DBs
Position
13:4179136..4212354
Genome browser
AA seq
724 aa
AA seq
DB search
MENQVRVVCPENEELAAFLWRKRQEMAEQPKGISENIDLTLYRAYSNVCRSEVPVKTLKE
FSQIKQWGLLILFPLSAWNGLVYICGRGVGKWILRLMQEYFKTDSGTSEPQDLSEKGKKA
KGTKRYMPQKNSVAYALLIALYRGTATGSDFMGKQDLINAAEASGLSRVPIVPEKEKGKR
GHFGSSSREWYSGWSCMKTLITKGLVVKSSCPAKYMLTQEGREAAHECLLRSGLADPIEN
LAATETTYLGTSNVLDLEFDHADLDEEDTIHSCLNGQKKSVDVPLESLEKFTRMGYTREE
VLRAFTEVAEISQKKGMSSLWPAVLCCLRENQVYGFHSESQANLREDCLSTATTHTFIDG
QVDLISENSQMDSACGGPLLMPKSSHPVDSVQSSFTLRACSSSILYGGCQLLLDPDLLFT
IYLHNSCKSGYSDDYPVQKLNSDGLKVNMNVLTMPPLLVGERFEDVYEVVLILDDREQFT
TQGSRSRKIIENICTQFKIQIEVRRLPVGDGIWVARHKHLDSEYVLDFIVERKNVNDLRC
SIRDNRYKDQKLRLLRCGLKKLIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGL
ADTLRKYGYLTQAITHSYRLQVIEDKLKNTSICPPFNEFIRSCNGLDKMTVSDVFAIQLM
QVPQVTEEVAVVVLDLYPTLLSLARAYSLLDGDILAQEEMLRKQSNNMVNAVASRNIFKL
VWGD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaggttagagtggtgtgcccagagaacgaagagcttgccgcgttcttgtgg
agaaagaggcaagaaatggcggagcagcccaagggaatttcggagaacattgacctgacg
ctctacagagcttattccaatgtttgcagatccgaagtcccagtcaaaaccctcaaggag
ttctctcagatcaagcaatggggtttattgattcttttccctctttctgcttggaacggt
ttggtttatatctgtggcaggggcgtggggaaatggattctgaggctgatgcaggagtat
ttcaagaccgattcaggcacttcagaaccacaagatttgtcagaaaaggggaagaaagct
aaggggaccaaacgttatatgccacaaaagaattctgtggcttatgcgctactgattgct
ctgtacagggggactgcaactgggagtgattttatgggtaaacaggaccttatcaatgca
gctgaagcaagtgggctttcacgggtgccaattgtgccagaaaaagagaaaggaaaacgt
gggcattttggaagttcttctagggaatggtatagtggatggagctgcatgaagacattg
ataaccaaaggactagttgtgaaatctagttgccctgcgaagtatatgctaactcaagaa
ggccgggaagctgcacatgaatgtctgttgagatctggtttggctgatcccattgagaat
ttggctgctacagaaactacatatctgggcacaagcaatgtgttagatttggagtttgat
catgctgacctggatgaagaggatacaatacattcctgcttaaatgggcagaagaaatct
gttgacgttccacttgaatctcttgagaagtttacacgtatggggtatactagggaagaa
gtacttcgtgcttttactgaagttgcagaaatttcccagaagaaggggatgtcctcactc
tggcctgcagtgttatgctgtcttcgagaaaatcaagtttatggttttcattcagagtct
caagcaaatctaagagaggattgtctctccacagcaaccactcacacatttattgatggt
caagtggatcttataagtgaaaatagtcagatggattctgcctgtggtggaccactactc
atgccaaagtcttcacatccagttgattctgtgcagagctcttttaccttgagagcttgt
tcatcatctattttatatggagggtgtcaattattgttggatcctgatcttctattcaca
atttacctgcacaactcgtgcaaatctggttactcagatgattatcctgttcaaaaatta
aattcagatggcttgaaagtgaatatgaatgttttgacaatgcctcctctgcttgttggt
gagagatttgaggatgtatatgaagtagtcttaatattggatgatcgggagcaatttact
actcaagggtcacgatcaaggaaaattattgagaatatttgcactcaattcaaaattcaa
atagaggttagacggttaccagttggagatggtatctgggtagctcgtcataaacatctt
gacagtgaatatgttcttgattttattgttgagaggaagaatgttaatgatttacgctgt
tcaatcagggataatcgctacaaggatcagaagttaaggcttttgagatgcggacttaag
aagctgatatatctagtggaaggtgatccaaattcttctgaagcagctgaaagcatcaaa
acagcttgtttcacgacagagatcttagagggatttgatgtgcagagaacaagtggctta
gctgatacgttgaggaagtatggctatcttactcaagcaataacccatagctacagattg
caggtgattgaggacaagcttaaaaacactagcatctgtcctcctttcaatgaatttatt
aggagttgcaatggcctggataagatgacagtcagtgatgtatttgccattcaactcatg
caggtcccacaggtaacagaggaggttgctgttgttgttctggatttgtacccaacactt
ttgtctcttgctcgtgcatattctcttcttgacggtgacatacttgcacaagaggagatg
ctcaggaagcagagcaacaacatggttaatgcagttgctagtaggaatatcttcaaacta
gtttggggtgattga
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