Vitis riparia (riverbank grape): 117929107
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Entry
117929107 CDS
T07274
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1-like isoform X1
KO
K27807
short internodes/stylish family transcription factor
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117929107
Transcription factors [BR:
vri03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117929107
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
117929107
NCBI-ProteinID:
XP_034705207
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Position
13:5968278..5973382
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AA seq
270 aa
AA seq
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MLTTALGVGLGVFPLFATTPTSTTCAAPLLPPKHTLNDEDNDGDSVNLEDGEGSMRACVD
CGNKAKRDCNYRMCRTCCKGRGYDCATHVKSTWVPAARRRERQAAVAAFVAGGGSSGSSS
AVAKRPRLGSTQAATASHTSTSLPNTPRSFDATSTHQDASFKESLPRQVRAPAVFRCIRV
TAIEDGRNEYVYQAMVKINGHVFKGFLYDQGVNEKGSYPCISELQLETNASGRNVDSSSP
ILHKADAYDASGCRGLLGGLIRRDNVPYFY
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccaccgctctaggcgtcggcctcggcgtttttcctctcttcgccaccaccccc
acctccacgacttgcgctgcaccgctgctgccgcccaaacatactttaaacgatgaagat
aatgatggggattcggtgaatttggaggatggtgagggtagcatgagggcgtgtgtggat
tgcgggaacaaggctaaacgggactgcaattataggatgtgcagaacttgttgtaagggt
cgtggctatgattgtgctactcacgtcaagagcacgtgggtgcccgcggctcgccgccga
gagcgtcaggcggcggttgcagcgtttgttgccggcggtggctcttctgggtcttcctct
gctgttgcaaaaaggccgagactcggctcaactcaggctgcaaccgcatctcatacctct
acctctcttcctaacactcctaggagctttgatgccacttctactcaccaagatgcaagc
tttaaggagagtttgccccggcaagttcgtgcaccagcggtgtttcggtgcatccgggtc
acggccattgaggatggccgaaatgagtatgtttatcaggcaatggtgaagattaatggg
catgtatttaaggggtttctatatgatcaaggggttaatgagaagggtagctatccatgt
atttcagaactacagttggaaactaatgctagtggaaggaatgtggattcttcttctcca
attcttcacaaagctgacgcttatgatgcttctggttgcagaggattgctgggagggcta
atcagacgagataatgttccttatttctattag
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