Vitis riparia (riverbank grape): 117929109
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Entry
117929109 CDS
T07274
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117929109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117929109
Spliceosome [BR:
vri03041
]
Common components
Common spliceosomal components
SR proteins
117929109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
RRM_occluded
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
117929109
NCBI-ProteinID:
XP_034705212
LinkDB
All DBs
Position
13:27387646..27391562
Genome browser
AA seq
304 aa
AA seq
DB search
MPRYDDRHGSTRLYVGRLSSRTRSRDLEDLFSRYGRVRDVDMKHDFAFVEFSDPRDADDA
RYSLNGRDFDGSRIIVEFAKGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAG
DWKNKCYRCGERGHIERNCQNSPKKLKRGRSYSRSPSPRRGRSRSRSRSRSYSRSRSYSQ
PRSSPKRERSAERLERRSRSPHDSRSPKRRKASPPPSKGRKRSPTPDERSPKERSPSPRD
RKQTTNGSDYSDSPRVKSRSPALDAERDSPRDRNYRRSPDEENGHSRSPSPIPRDDASPV
DDDE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtatgatgaccgccatgggagtacccgtctttatgttggtcgtttgtcttct
cggacaaggtcacgtgatctggaagacctatttagtagatatggaagagtacgcgatgtg
gacatgaagcacgactttgcctttgttgaattcagtgatccgcgagatgccgatgatgca
aggtatagcttgaatggtcgggatttcgatggaagtcgtataatagtagaatttgctaag
gggggtccacgcggtcctggtgggtctcgtgagtatcttggcagaggtcctccacctgga
tcaggtcgctgctttaactgtggaattgatggccattgggctcgagattgcaaagctggt
gattggaagaacaagtgttaccgctgtggggaacggggccatatagaaagaaattgtcag
aatagtccgaagaagctaaagcgtggacgtagttattctcggtctccatctcctcgtcgt
ggtcggagccggagccgaagcagaagtcgtagttacagcaggagccgcagttacagtcaa
cccagatcatctcctaagagggagcgaagtgctgagcgtctggagagaagatctaggagc
cctcatgacagcaggagccctaagcggcgcaaggcatcaccaccaccatcaaagggaagg
aaacgcagtccaacacctgatgagaggagcccaaaagagagaagcccctccccaagggat
cgtaagcagaccaccaatggttcagactacagtgacagccccagggtgaagagcagaagc
cctgcacttgacgctgaaagagacagcccaagagataggaattacaggaggagccctgat
gaagaaaatggccacagccgcagccctagtcccattcctagggacgatgcaagtcctgtt
gatgatgatgagtaa
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