Vitis riparia (riverbank grape): 117929137
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Entry
117929137 CDS
T07274
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117929137
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117929137
04147 Exosome [BR:
vri04147
]
117929137
04090 CD molecules [BR:
vri04090
]
117929137
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117929137
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117929137
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117929137
CD molecules [BR:
vri04090
]
Proteins
117929137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
Zeta_toxin
AAA_22
AAA_16
RsgA_GTPase
HupE_UreJ
AAA_30
Motif
Other DBs
NCBI-GeneID:
117929137
NCBI-ProteinID:
XP_034705248
LinkDB
All DBs
Position
13:complement(26833779..26861440)
Genome browser
AA seq
1410 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLEPNVDAVPVEVEEEIEEPEEIEPPP
AAVPFSRLFACADGLDWGLMVIGSLAAAAHGTALVVYLHYFAKIVQLLDVVPDARDELFR
RSTELACTMVFIAVGVFVAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNN
GDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLIIGFINCWEIALITLATGPFIVAA
GGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYG
ILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGRAHGGEIITALFSVILSGLGLNQA
ATNFYSFDQGRIAAYRLFEMISRSTSVVNHDGNTLPSVQGNIEFRNVYFSYLSRPEIPIL
SGFYLSVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQI
GLVTQEPALLSLSIRDNIAYGRPSATSDQIEEAAKIAHAHTFISSLEKGYETQVGRAGLA
LTEEQKIKLSVARAVLSNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLS
LIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLKCEEAAKLPRRMPVRNYKETATFQ
IEKDSSASHCFQEPSSPKMVKSPSLQRVPGIHGFRPSDLAFNSQESPKTRSPPPEQMMEN
GVPLDSTDKEPSIKRQDSFEMRLPELPKIDVQAAHQQTSNASDPESPVSPLLTSDPKNER
SHSQTFSRPHSQFDDVPMRTKDAKDVRHRESPSFWRLVDLSLAEWLYAVLGSIGAAIFGS
FNPLLAYVIALIVTAYYRGGEGGEHSRDDRRHLRQEVDKWCLIIACMGVVTVVANFLQHF
YFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSI
FIQDIAAVIVAVLIGMLLGWRLALVALATLPILTVSAFAQKLWLAGFSRGIQEMHRKASL
VLEDAVRNIYTVVAFCAGNKVMELYRRQLRKIFKQSFFHGMAIGFAFGFSQFLLFACNAL
LLWYTAVSVKHQYMDMPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLTSVFEIIDRV
PNIDPDDNSAMKPPNVFGTIELKNVDFCYPTRPEVLVLSNFSLKVSGGQTVAVVGVSGSG
KSTIISLIERFYDPVAGQVSLDGRDLKSYNLRWLRNHLGLVQQEPIIFSTTIRENIIYAR
HNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPIL
LLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIMEEGS
HDSLVAKNGLYVRLMQPHFGKGLRQHHRLV
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatcgagagggctgttcgggtggtctccgccgcacatacagccgctgacgccg
gtgtcggaggtgtcggagcctccggaatcgccgtcgccgtacttggagccgaacgtggat
gcggtgccggtggaggtggaggaggagattgaggagccggaggagatcgagccgccgcct
gcggccgtgcccttctcgcggctttttgcgtgtgccgatggactcgactggggtttgatg
gtgattggatccttggccgctgcggctcacggtactgcactggtagtttacttgcattat
tttgcgaagattgttcagttgctggacgttgttcccgatgcacgggacgagttgtttcgt
aggtctacggagcttgcttgtactatggtttttattgcagtgggggtttttgttgctggt
tggattgaggtctcatgttggattcttaccggagaacggcagacagctgtcatcagatca
agatatgttcaagtactgctcaatcaggacatgagtttttttgatacatatggtaacaat
ggagacattgtgagccaagtgctgagtgatgtgctgctcattcagtctgctcttagtgaa
aaagttgggaattatattcataacatggctactttttttagcggcctcattattggattt
atcaactgttgggagattgccctcattacattggccactggaccatttattgttgctgct
ggcggaatatcaaatatttttctgcataggcttgctgagaatattcaagatgcctatgct
gaagcagcaagtattgctgaacaggcagtctcttatattaggaccctatacgcattcaca
aatgaaacattggccaagtattcctatgcaacttcactacaagcgacactgagatatggc
atattgataagtcttgtgcaaggacttgggcttggatttacatacgggcttgcaatatgt
tcttgtgccttacagctttgggttggaaggttcttggttatacatggaagagctcatggt
ggtgaaattataactgcactattctctgtaattttaagtggccttgggcttaatcaggca
gcaacaaacttctattcatttgaccaagggcgaattgctgcgtataggctttttgagatg
ataagccgttcaacctctgtggttaatcatgatgggaatactctaccttctgtacaaggg
aacattgagtttcggaatgtatattttagttacctatctcgtccagaaattcctatcttg
agcgggttttacctaagtgtacctgctaaaaaagcagtggcacttgttggcaggaatggg
tctggaaaaagcagcattattccgctaatggagcggttttatgatcccacattaggagaa
gtccttttggatggagagaatattaaaaacctgaagctggaatggctaagaagccaaata
ggacttgtcacccaggaacctgctttactaagtttgagtattagagataatattgcttat
gggcgacctagtgctacttcagatcagattgaagaagctgctaaaatagctcatgcacat
acatttatcagctcacttgagaaaggatatgaaacacaggtgggaagggctggtctagca
ttgactgaagaacagaaaataaaactttctgttgctagagcagtgctttcaaatccatct
attcttctgcttgatgaagttactggaggactagattttgaagctgaaagagctgtacag
gaggctttagatctccttatgttgggacgatcaacaataataatagctaggcggcttagt
ctcataaggaatgcagattacatagctgtgatggaagagggtcaacttgttgaaatgggt
acacatgatgaattattaactttggatggcctatatgctgagcttctcaagtgtgaagaa
gctgcaaaacttccaaggaggatgccagtgaggaattacaaggagacagcaactttccaa
attgaaaaagattcatcagcaagtcattgtttccaagaaccatcttcccctaaaatggtc
aaatcaccttctcttcagagagttcctggcatccatggatttaggccctcagatcttgct
ttcaactcacaagaatcaccaaaaactcgaagccctccacctgagcaaatgatggaaaat
ggtgtgcctttggactctacagataaggagccttcaataaagaggcaggacagttttgaa
atgagactaccggagttacccaagattgatgtccaggcggcacatcaacaaacatcgaat
gcttcagaccccgaatcccctgtttcaccacttttgacatctgatccaaaaaatgaacgt
tcccattcacaaacttttagtcggccccatagtcaatttgacgatgtgccaatgagaaca
aaggatgcaaaggatgtgcgacatcgagaatcaccttcattttggaggcttgtagacctt
agcttggcagaatggctttatgctgtcttaggaagtattggtgctgctatctttggttct
tttaatccacttcttgcttatgttattgcactgatagtaacagcatattatagaggcggt
gaaggtggtgaacattctcgtgatgatcgtcgtcacttgaggcaggaagtagataaatgg
tgcttgatcattgcttgcatgggtgttgtgacagtggttgccaattttttgcagcatttc
tacttcggtatcatgggagagaaaatgacagaaagagttaggagaatgatgttctcagca
atgctgcgtaatgaagttggatggtttgatgaagaggagaacagtgctgataccttgtcc
atgcggttggcaaatgatgctacgtttgtgcgagctgcatttagcaaccgactttctata
tttatacaggacattgcagctgttattgtggctgtccttatagggatgttgctgggatgg
agattggctcttgttgctttggcaaccctacctattcttactgtttctgctttcgcccag
aaattgtggcttgctggattctcaaggggcatacaggagatgcacaggaaagcatctttg
gttctcgaggatgcagttaggaatatttacactgttgtagctttctgtgctggcaacaag
gtaatggagctttacagacggcaactgaggaaaatattcaagcagagcttctttcatgga
atggctatcggttttgcttttggcttttcacagtttcttctttttgcctgcaatgctctt
ctcctctggtacacagcagtctctgttaaacaccagtatatggatatgcctacagctctc
aaggagtacatggtattctcttttgcgacctttgcccttgtggagccttttggcttggct
ccttacatacttaaacgacgaaaatctcttacttcagtatttgaaatcatagaccgagtg
cctaatattgaccctgatgacaactcagcaatgaaaccccccaatgtatttggtactatt
gagttgaaaaatgttgacttctgttatccaacacggccagaagtgctagtgttgagcaat
ttcagtcttaaggtcagtggaggacaaactgtagctgtagtgggagtttcagggtcagga
aaaagcactataatatctttaatagagagattttacgatccggttgctggtcaggtttct
ctagatggacgggatttgaaatcgtataacttgcggtggttgaggaaccacctgggtctt
gttcaacaggaacctatcattttctcaacaaccattagggaaaatatcatatatgcaagg
cacaatgcaagtgaagctgagatgaaagaggcagcaaggatagcaaatgctcaccacttc
atcagcagcttgcctcatggttatgacacacatgtggggatgaggggtgtagatctaacc
ccaggacaaaaacagagaattgcaattgctcgggtggtgttgaagaatgcacctatcttg
ctgttggatgaagcaagctcttccattgagtctgagtcaagccgagtggtgcaggaagct
cttgatacattgatcatggggaacaaaacaactattctgatagcccacagagctgcaatg
atgaggcatgttgacaacattgtagttcttaatggagggcggatcatggaggaagggtcc
cacgattctttggtggcgaagaatggtttgtatgttcgtttgatgcaaccccactttggg
aagggtttgcgtcagcatcatcgacttgtttag
DBGET
integrated database retrieval system