Vitis riparia (riverbank grape): 117929146
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Entry
117929146 CDS
T07274
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117929146
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117929146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_DCAF4
WD40_RFWD3
NBCH_WD40
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_like
Motif
Other DBs
NCBI-GeneID:
117929146
NCBI-ProteinID:
XP_034705255
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Position
13:complement(21335688..21351154)
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AA seq
536 aa
AA seq
DB search
MGVEQANGTPTEVVPPSEQDISDELDVKVKKYLRGEGANLEALQDKKLKGQLVIREELYG
KSAKAAAKAEKWLMPSEGGYLEAEGIEKTWRIKQESIAREVDILSSKNQYDIVLPELGPY
TLDFTSSGRYMAVGGRKGHLAVIDMKSMGVIKDFQVRETVRDVVFLHNELFFAAAQKKYP
YIYNRDGTELHCLKEHGSVLKLQFLKNHFLLASINKFGQLHYQDVTMGEMVGNYRTGLGR
TAIMQVNPFNGVVGLGHSGGIVTMWKPTSSAPLVKMLCHHGPVSALAFHPNGHLMATAGM
DKKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLATGTGSFVQILGDFSGTENYSRYMGHS
MAKGYQIGKVLFRPYEDVLSIGHSMGWSCILIPGSGEPNFDSWVANPFETSKQRREKEVH
SLLDKLPPETIMLDPTKIGTVRQSRKREKPTKQERKAEMEAAVEDAKSIPLRKKMKGKNK
PSKKVKKREEAVARAKKPFLERQMDEENLSRKKQKISGEIELPKSLQRFARKKATT
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggaacaagcaaatggcactcctacagaggtggtgccgccttccgaacaggat
atctctgatgagttagatgtgaaagtgaagaagtatcttagaggtgaaggtgctaattta
gaggctttacaagataagaaattgaagggtcaacttgttattagagaagaattatatgga
aaatctgcaaaagctgctgccaaggctgagaagtggcttatgccaagtgagggaggctat
ttggaggcagaaggtatagagaagacttggaggatcaaacaggagtctattgcacgtgaa
gtggatatcctaagctcaaagaatcaatatgatatagtcttaccagagcttggtccttac
actctggatttcacctcaagtggtcggtatatggcagttggaggacgtaagggccacctg
gctgtcatagatatgaaaagtatgggtgtaattaaagactttcaggttagggaaacagtc
cgtgatgtggtgttcttgcacaatgagctgttttttgctgctgcccaaaagaagtatcca
tatatttataaccgggatgggacagaacttcactgtctaaaggagcatggttcagtacta
aaacttcagtttctgaaaaaccatttcctcttagcatccataaataaatttgggcagctt
cattaccaagatgttactatgggtgaaatggttggtaactaccggactggactaggccgt
actgccataatgcaggtgaatccattcaatggagttgttggtttgggtcattctggtggt
atagtgaccatgtggaagcctaccagctctgctcccctcgtgaagatgctgtgtcatcat
ggacccgtctcagctttagcattccaccccaatggacatctcatggccacagctggcatg
gataagaaaatcaagctttgggacttgaggaaatttgaggttctccaaactttaccaggc
catgccaagaccttggacttcagtcagaaaggtttgcttgccactggaaccggctcattt
gtacaaattctcggagatttctcagggactgaaaattatagtcggtatatgggtcattcc
atggcgaaaggctaccagataggaaaagttctgttccgaccatacgaagatgttctgagc
atagggcactctatgggttggtcttgtattctcatccctggatctggagaacccaacttc
gattcatgggtagcaaacccgtttgaaacatcgaaacagcggagagagaaggaagtacac
tctcttctcgacaagctcccgcctgaaacaattatgctggaccccaccaagattggtaca
gtgaggcaatcaaggaagagagagaagccaacaaagcaggagagaaaggccgaaatggag
gctgctgtggaagatgccaagagcattcccctgaggaagaaaatgaaggggaagaacaag
ccgagtaagaaagtgaagaagagggaggaggcagttgccagagccaagaagccattcctg
gagcgacaaatggatgaagaaaatttgtctagaaagaaacagaaaataagtggggaaatt
gaactgcccaaatctctacagcgctttgctcgcaagaaagcaacaacatga
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