KEGG   Vitis riparia (riverbank grape): 117929225
Entry
117929225         CDS       T07274                                 
Name
(RefSeq) protein FIZZY-RELATED 3
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117929225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vri04121]
    117929225
Ubiquitin system [BR:vri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     117929225
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_Aladin WDR55 WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 NBCH_WD40 Tricorn_2nd MIOS_WD40 Beta-prop_HPS5 Aldo_ket_red Beta-prop_SPT8 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_IFT122_2nd Ge1_WD40
Other DBs
NCBI-GeneID: 117929225
NCBI-ProteinID: XP_034705388
LinkDB
Position
13:26028471..26031032
AA seq 472 aa
MDSSERRKSGLNLPAGMSETSLRLETFSGSYRAISNLSSPSKATSCSDRFIPCRSSSRLH
TFGLIEKASPVKEGGNEAYFRLLKQELFGSDFGSSSPAGQGSPMSPSKNMLRFKTDHSGP
NSPFSPSIFGPDSGFSSETSTPPKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNVLA
VGLGTCVYLWTASTSKVTKLCDLGPSDSVCSVQWTREGSYISIGTHLGQVQVWDGTQGKK
VRTMSGHQTRTGVLAWSSRILSSGSRDRNILQHDLRVSNDFVSKLVGHKSEVCGLKWSHD
DRELASGGNDNQLLVWNQHSQQPVLKLTEHTAAVKAIAWSPHQSGLLASGGGTADRCIRF
WSTTNGNQLNHVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSMTKVATLTGHSL
RVLYLAMSPDGQTIVTGAGDETLRFWNIFPSMKTPAPVKDTGVWSMGRTHIR
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggattccagtgaaagaagaaaaagtggattgaatctcccagctgggatgtctgaaacc
tctctgcgccttgagactttttcgggttcctatcgggcgatatcaaacttgtcgtccccg
tcgaaagccacaagttgtagcgaccgattcataccatgcagatcttcgtcaaggcttcat
acttttgggctaatcgagaaggcatcgccggttaaggaaggcggaaacgaggcgtatttt
aggttgttgaaacaggagcttttcgggtctgattttggttcttcatctcctgcaggtcaa
gggtctccgatgagtcccagcaagaacatgctaaggttcaagacggatcattcggggcct
aattcgcccttttccccttccatttttggtcctgatagcgggttttctagtgagacttct
acgcctccaaagccgcctcggaaggtccccaagacaccccataaggttctggatgcccca
tcacttcaagatgatttctacttgaaccttgtggactggtcttcacagaatgtgcttgca
gttggattgggcacctgtgtttatctatggactgcatccaccagcaaggtgaccaagttg
tgtgatttggggcccagtgacagtgtgtgctcggtccaatggacccgagagggttcatac
atatcgattggtacacatcttggtcaagttcaggtgtgggatggaactcagggcaagaag
gtccgaaccatgagcggacaccaaacaaggaccggagtcctggcttggagctcgcggata
ttatcttctggaagtagagaccgcaacatacttcaacacgatcttcgtgtttcaaatgac
tttgttagcaagcttgtagggcacaaatccgaagtgtgtgggctgaaatggtcccatgat
gatagagaacttgcatcaggtggtaatgataatcagctattggtgtggaaccagcattct
cagcaaccagttttgaagttgacagagcacacagctgctgtgaaggccatagcttggtca
cctcaccagagcggcctccttgcgtccggaggtgggactgcagaccggtgtatccgcttc
tggagtactacaaatgggaatcaattaaaccatgttgacacaggaagccaggtatgcaat
ctggcatggagtaagaatgtgaacgagctagtcagcactcatggctattcccagaatcag
attatggtctggaaatacccatcaatgacaaaggttgcaactctaactggccatagtttg
cgagtgctctatcttgccatgtcgccggatggtcagacgatagtaacaggagcaggggat
gagacattacggttttggaatatcttcccttccatgaaaacaccagcaccagtcaaagat
acaggtgtttggtcaatgggacggacgcatattcgatga

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