KEGG   Vitis riparia (riverbank grape): 117929380
Entry
117929380         CDS       T07274                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vri04121]
    117929380
Enzymes [BR:vri01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117929380
Ubiquitin system [BR:vri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117929380
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 Prok-RING_4 zf-RING_4 zf-rbx1 Rtf2 zf-RING_10 RING_XB3-XBAT31 zf-ANAPC11 zf-Nse TRAF3_RING Zn_ribbon_6 TerY_C zf-RING_6 YacG
Other DBs
NCBI-GeneID: 117929380
NCBI-ProteinID: XP_034705573
LinkDB
Position
13:14070764..14076046
AA seq 209 aa
MSASGVREVPLRYARSSRRRKTVLNLDLNDAPPTDTRDQEGPSIRTMPVPPAAIDVEAID
DEVVESSATAFAAARNNSRRIRGRTVVDVDLEVQTTRPLNNRNKRRRAPPNQTIINDDRY
INLESSNSLLRENKPPEQTWHVPPLPPKEPTFNCPICMGQLVDEMSTKCGHIFCKMCIKA
AISAQGKCPTCRKRVTMKDTIRIYLPAAS
NT seq 630 nt   +upstreamnt  +downstreamnt
atgagcgctagtggggtaagagaagttccattgaggtatgcaaggagcagtaggcgaagg
aagacagttctgaacttggatctcaatgatgcaccacccactgatacgagggaccaggag
gggccttcaatccgaacaatgccagtaccccctgctgccattgatgttgaggccattgat
gatgaagttgttgaatcctcagccacagcctttgcggcagctagaaacaattccagaagg
attcgtggaaggacagttgttgatgtagatttggaagtacaaacaacaagacctcttaat
aaccgcaacaagcgtagaagagctcctccaaatcaaacaattatcaatgatgatcgttat
ataaacttggaaagcagtaacagcttgttgagagagaataagcctccagaacaaacttgg
catgttccgcctctgccacccaaggagcccaccttcaactgtccaatttgcatgggtcag
ttagttgatgagatgtcaacaaaatgcggtcacattttctgtaagatgtgcattaaggct
gctatatctgcccagggtaaatgccctacctgtaggaaaagggtcaccatgaaagatacc
atcagaatttaccttcctgcagccagctga

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