Vitis riparia (riverbank grape): 117929393
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Entry
117929393 CDS
T07274
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2 isoform X1
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117929393
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
117929393
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
117929393
NCBI-ProteinID:
XP_034705595
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Position
13:complement(28839262..28848793)
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AA seq
875 aa
AA seq
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MASRTHQPPPLSLSSDSDTDSEGNSGGVETLRHGDLSDSIFKSYIQITGRSSPDLSKIQS
FLTSSRSGALSCLICLERIRPSDPTWSCTSGCFAVFHLICIQSWARQASDLSASRATARL
SADLFPAAAAKAIEDAAWHCPKCRFEYSKALIPKAYFCFCGKLQDPPRDPWILPHSCGET
CNRPLKNNCGHYCLLLCHPGPCPSCPKLVQARCFCGSVEDVQRCGFKKFSCKNVCSKLLD
CGIHRCSDTCHDGPCPPCQARSVYRCQCGEIEEERECCDRVFRCDVPCGRVLGCGKHACS
KGCHSGVCGQCPLQGRRTCPCGKRVYEGMACDVSVPLCGATCDKMLSCGFHSCPERCHRG
QCIKTCRTVVIKGCRCGSLKKEVPCYQDLACERKCQKVRDCGRHACKRRCCDGDCPPCSE
ICGKRLRCKNHKCPSPCHRGPCAPCPVMVTISCSCGETHFEVPCGTETEQKPPKCSKLCH
ITPLCKHGSDCKPHRCHYGACPPCRLLCEEEFPCGHKCKLRCHGPKPPPNPEFTLKPKKK
KSNHQAEGTPGSPCPPCSELLWRSCVGQHIGTERMMLCSDRKKISCENLCGNLLPCGNHY
CTKTCHALMSQFLTSVQNQRGESCEDCHLPCEKERRPKCPHPCPSPCHPGECAPCKVLIK
RSCHCGSMVHVFECLYFNSLSEKEQMTIRSCGGPCHRKLPNCTHLCPETCHPGQCPSPDK
CSKKVTVRCGCQTLKKEWLCHDVQAAYLNVSCDPKDVSKNQFGLGLLPCNSECKSKVKVV
DSELQLRKPKVVERKEPHVEKHVPKRRKRRERVQEVQQISRLQKIISTTWRLLLYFTLLM
VLIAVTYYGYKGLLWLSDWMNEVEEKRERRRYPQI
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaggacccaccaaccaccgccactctctctctcgtcggattcagataccgat
tccgagggaaattccggcggagtagagactctccggcacggtgacctctcggactctatc
ttcaaatcctacattcagatcacaggtcgttcatcgcctgatctctcgaaaatccaatct
ttcctcacatcatcgcgctccggggctctgtcatgcctaatttgcctggagcggatccgg
ccctctgatcccacctggtcttgcacctccggctgctttgccgtcttccacctcatctgc
atccaaagctgggcccgccaagcctccgacctctccgcttcacgcgccactgcacgcctg
tccgccgatctcttccccgccgcagcagcaaaggccattgaagacgccgcctggcattgc
cccaagtgccgattcgagtattctaaagccctaatccccaaagcttacttctgtttttgt
ggtaaattacaagacccaccgagggacccgtggatcttaccgcattcatgcggcgaaaca
tgtaatcgcccactgaagaacaattgtggccactattgtttgctgctctgccaccctggc
ccctgtccatcctgcccaaaacttgtgcaagctcgttgtttttgtgggtctgtcgaagat
gttcagcgatgtgggttcaagaaattttcgtgtaagaatgtttgttccaagttattggat
tgtgggattcaccggtgttcggatacttgtcatgatggcccttgccctccttgtcaagct
cgcagtgtttatcggtgtcaatgtggagagatagaagaagagagggagtgctgcgatcgg
gtctttcggtgtgacgtcccgtgtgggagagtgcttgggtgtgggaagcatgcgtgcagt
aaaggttgtcattcgggtgtgtgtggtcagtgcccacttcagggaaggaggacatgccct
tgtgggaagagggtgtatgaagggatggcttgtgatgtctcggtgccactctgtggagcc
acttgtgataagatgttgagctgcgggtttcatagttgcccggagcgatgccatagaggc
caatgcattaagacttgcaggactgttgtcattaaaggatgtcggtgtggtagcttgaag
aaagaggttccttgctatcaagatttggcatgtgaaaggaaatgtcagaaagtacgagat
tgcggacgccatgcttgtaaacgtcgatgctgtgatggggattgcccaccatgctctgag
atttgtggcaagaggcttagatgtaagaaccacaagtgcccttctccatgccatagaggt
ccctgcgctccttgccctgtcatggtgacaatttcatgttcgtgtggtgagacacatttt
gaggttccttgtggtactgaaacagaacagaagcctccaaaatgttccaagttatgtcac
ataactcctttatgcaaacatggatcagattgtaagccacatcgatgccattatggagct
tgccccccatgtcgactgctatgtgaagaagaattcccatgtggccataagtgcaagctc
aggtgtcatggccctaaaccaccacctaatcctgaattcacattgaaacctaagaaaaag
aagtcaaatcatcaggctgaagggactcctggttcaccatgtcctccttgctcagaactc
ctttggaggtcttgtgttggccaacacattggcacagagagaatgatgctctgctcggat
agaaaaaaaatttcttgtgaaaatttgtgtgggaatcttcttccttgtggcaatcactat
tgtactaaaacttgccatgccctgatgagccagtttttaacatcagttcagaatcaaaga
ggcgagtcctgcgaagattgccatctaccttgtgaaaaggagaggaggcccaaatgccca
catccttgtccatcaccatgtcatccaggagaatgtgccccttgcaaagtgcttataaaa
agatcatgtcattgtggttccatggtccatgtttttgagtgcttgtatttcaacagcttg
tcagaaaaggagcaaatgactattcggtcttgtggtggaccctgccatagaaagttaccc
aactgtactcatctctgcccagagacttgccatcctggtcaatgcccatcacctgataag
tgctctaaaaaggtaactgttcgctgtggatgtcagaccttgaaaaaggaatggctatgt
catgatgttcaagcagcctatctcaatgttagttgtgatccaaaagatgtatctaaaaat
caatttggacttggacttcttccttgcaattcagagtgtaagagtaaagtgaaggtggtt
gattcagaattacaattacgtaaaccgaaagttgtggagcgaaaggagccacatgtcgaa
aagcatgtaccaaagcgtagaaaaagacgggaacgggtacaagaagtgcagcaaatctct
agactgcagaaaattatttccaccacatggaggcttcttctgtatttcacccttttgatg
gttctgatagcagtgacatattatggttacaagggtctcttgtggctctctgactggatg
aatgaagttgaagagaaaagagaaagaagaagatacccgcaaatctga
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