Vitis riparia (riverbank grape): 117929404
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Entry
117929404 CDS
T07274
Name
(RefSeq) probable dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117929404
Enzymes [BR:
vri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
117929404
Ribosome biogenesis [BR:
vri03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
117929404
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Fer4_12
Radical_SAM_2
Motif
Other DBs
NCBI-GeneID:
117929404
NCBI-ProteinID:
XP_034705603
LinkDB
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Position
13:26494384..26499325
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AA seq
406 aa
AA seq
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MALLQHLCSAPLTRAIRSRSLTLSSRTMSTALTPTRVTHVDSHVLLGMSEQELQQLSLDL
GQQSYRGKQLHHLIYKRKVKEIQDFSQLPQAFRNDLQEGGWRVGRSSIHQSVTAADGTVK
LLIKLADNRLVETVGIPVEHDKGSFRLTACVSSQVGCPLRCSFCATGKGGYSRNLQRHEI
IEQVLAIEEIFKQRVTNVVFMGMGEPMLNLKSVIEAHRCLNKDVQIGQRMITISSVGVPN
TIKKLASYKLQSTLAISLHAPNQKLRETIVPSAKSYPLDAIMKDCRDYFLETSRRVSFEY
TLLAGVNDAVEHAIELAELLHEWGPGYHVNLIPFNPIEGSEFQRPYNKVQAFAAALESRK
VTVSVRQTRGLDASAACGQLRNEFQKIPLQSDSNNLQSQLDVPIAC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgctactccagcacttgtgctctgcgcctctcacacgtgcgatacgctctcgctcc
ttaaccttgtcctcacgcaccatgtcaacagccctcacgcccacacgcgtgacgcatgtg
gattcccacgtgctacttggcatgtccgagcaagagctccaacagctctctctcgatctc
ggtcagcaaagctatagggggaagcagctccatcatcttatctacaagagaaaggtcaaa
gaaattcaagatttcagtcaattgcctcaggcctttaggaacgatcttcaggaaggcgga
tggagggtggggcgatcatccattcaccagtctgttactgcagctgatggcactgttaag
ctattgataaaactggcagacaacagattggttgaaactgttggaataccagttgaacat
gacaaaggctcatttcgccttactgcatgtgtctcatcacaggttggctgtccattgcgc
tgttcattttgtgccactggcaagggaggttactcaaggaaccttcagaggcatgaaatt
attgagcaggtcttggcaatagaggagatctttaagcaaagggtgacaaatgtggtgttt
atgggaatgggcgaaccgatgttgaacctgaaatcagttattgaagctcaccgttgcttg
aataaggatgtgcaaattgggcaaagaatgatcacaatttcctccgtaggggttcccaac
acaattaagaagttggcttcttacaaacttcaatccacattggctatcagcttgcatgct
ccaaaccagaaactaagggaaacaattgtaccaagtgcaaagtcctaccctctggatgca
attatgaaggattgcagggactacttcctggaaactagccgtcgcgtatcttttgagtac
acacttttagctggtgtaaatgatgctgtggagcatgcaatagagcttgcagaactactc
catgaatggggaccgggttatcatgtgaacctgatacccttcaatccaattgaaggctct
gaatttcagcgtccatataacaaggtgcaagcatttgctgctgccctggagtcacgtaaa
gtaactgtcagtgtgcgtcagacacggggtcttgatgcaagtgcagcttgtgggcagcta
agaaatgagttccagaagatccctttgcaatctgactccaacaacctccaatctcagtta
gatgtcccaattgcttgttga
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