Vitis riparia (riverbank grape): 117929445
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Entry
117929445 CDS
T07274
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vri03032
]
117929445
03400 DNA repair and recombination proteins [BR:
vri03400
]
117929445
Enzymes [BR:
vri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117929445
DNA replication proteins [BR:
vri03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117929445
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
117929445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
UBA_7
Motif
Other DBs
NCBI-GeneID:
117929445
NCBI-ProteinID:
XP_034705608
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Position
14:complement(27926380..27935055)
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AA seq
893 aa
AA seq
DB search
MDGNHVHSDQVIAELIEMGFEFSAVTEAIEVVGPSLDDSIEFILNGPHRSSRGASSNSKC
STSTGKALDKTALISSHSLDQMRQSSITEHLQPVGRSKRIRTNSVYNAVSPYGSEMLSGH
LEEQVSSFSGEGCNLKAASELSALPVCCQQELEIEKDWVQRVNSLLHKHFGILSLKSFQK
EALSAWLAHQDCLVLAATGSGKSLCFQVPALLTGKVVVVISPLISLMHDQCLKLAKHGVS
ACFLGSGQPDSSVEQKAMSGMYEIIYVCPETVLRLIKPLQRLAENRGIALFAIDEVHCVS
KWGHDFRPDYRRLSVLRENFSACSLKFLEFDIPIMALTATATIRVREDILHSLCMSKEAK
IVLTSFFRSNLRFSVKHSRTSSPSSYEKDFSELIDVYTKSKIGEKKQKIFSQELDDASDD
STTSADRSLSEADRMSPSDVENNGDGYFGENDDEANSLQENGSAASKQRQMSVEYLENEV
DLFQSVDDWDVSCGEFSGQPPTEHTFGSSETLDPSMKLDERLTLLKGPLEQGPTIIYVPT
RKETLNIAKYLCRCGVKAAAYNAKLPKSHLRRVHKEFHDNALQVVVATIAFGMGIDKLNV
RRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLSRVPTLLPSQRSEDQTKQAYKML
SDCFRYGMNTTCCRAKTLVEYFGEDFCHQSCILCDVCVNGPPEKQNLKDEADTFMHVIAA
HYGKSSFVDDLYDDVIYGDVEQQRFMDKPNLRMLVSRIREQFQKFAATDLLWWRGLARIM
EDKGYIREGEDRIHVQIKFPKPTKLGLEFLQSTTEQTFDVYPQADMLLSMRNPKSYSTFS
EWGKGWADPEIRRQRLERRQSQRKPRKRKSRKHQPNMKTVRGRLATKLSIQKR
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaaccatgtacactccgaccaagtcattgcagagctgattgaaatgggattt
gagttttcagctgttacagaagctatagaagttgttggtccatcattagatgattctatt
gagtttattttgaatggtcctcatagatccagtaggggggcatcaagtaattctaaatgt
tctaccagcactggaaaagctctggacaaaacagctttgatctcctcgcactctctggat
caaatgcgtcagtctagcataacagaacatctccaaccagtaggtagatccaaacggatc
agaactaattctgtatataatgcagtatcaccctatgggtcagagatgttgtctggtcat
ctggaagaacaggtgtcgtcattttctggtgagggttgtaatttgaaagctgcctcagag
ttgtctgcactgccagtttgttgccaacaagagctggagattgaaaaggattgggtgcaa
agagtcaatagtctcttgcacaagcattttgggattttgtccttgaagagtttccagaag
gaagccctgtctgcttggttagctcaccaagactgtcttgttcttgctgcaacaggatct
ggaaaatctctctgttttcaagtcccagcacttctgacaggaaaggttgtggtagtaatt
tcacccttgataagtttaatgcacgatcagtgcttaaagcttgcaaaacatggggtgtca
gcttgctttctggggtctggacaacctgacagcagtgtggagcaaaaagcaatgagtggc
atgtatgagataatttatgtttgcccagagacagtattaagactaataaaaccgcttcag
aggcttgcagaaaatcgcggaattgcactatttgcaattgatgaagttcattgtgtttct
aagtggggccatgattttcgacccgactacaggcgattatctgtcttgcgagagaacttc
agtgcttgcagcttaaaatttttagaatttgatataccaataatggcattgactgctact
gcaacaattcgtgtccgagaagatatccttcattcactgtgcatgtcaaaggaagcaaaa
attgtgctcacttcatttttccgatcaaatttaaggttttcagttaaacatagtagaaca
tcatctccatcttcttatgagaaggatttctctgagttgatagatgtgtacacaaagagc
aagattggtgagaagaaacagaagatcttctctcaagagttggatgatgcatctgatgac
tccaccacctctgctgataggagcttatctgaggcagatagaatgtctccaagtgatgtg
gaaaacaatggtgatggctactttggggaaaatgatgatgaagcaaattcattgcaggaa
aatggctcagctgcttcaaagcagagacagatgtcagttgaatatctggaaaatgaggtt
gacctctttcagagtgtagatgactgggatgtttcctgtggtgaattctctggacaacct
cctactgaacatacatttggctcatctgagacattggatccatcaatgaaactggatgaa
agattgacacttttgaaggggcctttagaacaaggaccaactatcatatatgttcctact
agaaaagaaacattaaacatagcaaaatatctttgtcggtgtggtgtaaaggctgctgct
tacaacgcgaagttgccgaaatcacatctaaggcgtgttcacaaggaattccatgataat
gctttacaggttgttgttgcaacaattgcttttggaatggggattgataagttaaatgtc
cgaagaatcatccattatggttggccacagagtttagaagcatattatcaagaagcaggt
cgagctgggagggatgggaaattagcagattgcattctatatgctaacctttcaagagta
ccaactcttttgccaagtcaaagaagtgaagatcagacaaaacaagcatataagatgtta
tctgattgcttcagatatggaatgaatactacatgttgtcgagccaaaacacttgtggag
tactttggggaggatttttgtcatcaaagttgtatcttgtgtgatgtgtgtgttaatgga
cctcctgaaaagcagaatttgaaagatgaggcagatacttttatgcatgtgattgctgct
cattatgggaagagcagttttgtggatgatttgtatgatgatgtgatatatggtgatgtt
gaacagcagagattcatggataaaccaaatctcaggatgcttgtcagtagaataagagaa
cagtttcaaaaatttgcagcaactgatctgttgtggtggcgaggtcttgctcgaatcatg
gaagataaagggtacatcagagagggagaggacaggatccatgtccagataaaatttcca
aagccaacaaaactgggactggagttcttgcaatccacaacagagcaaacattcgatgtt
tatccccaagcagatatgctgctctcaatgagaaaccccaaatcttattccactttctca
gaatggggaaaaggctgggctgatcctgagattcgtcgccagcgcttagaaaggaggcaa
tcccaaagaaagcctaggaaaagaaaatcaagaaaacatcaacccaacatgaaaacggtt
cgtggaaggttagcaacaaaactctcaatacagaaacgataa
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