Vitis riparia (riverbank grape): 117929446
Help
Entry
117929446 CDS
T07274
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117929446
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vri01007
]
117929446
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117929446
Enzymes [BR:
vri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
117929446
Amino acid related enzymes [BR:
vri01007
]
Aminoacyl-tRNA synthetase
Class II (A)
117929446
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117929446
Prokaryotic type
Other AARSs
117929446
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Spexin
Seadorna_VP4
Membralin
Motif
Other DBs
NCBI-GeneID:
117929446
NCBI-ProteinID:
XP_034705609
LinkDB
All DBs
Position
14:complement(27907850..27923944)
Genome browser
AA seq
620 aa
AA seq
DB search
MEGAAEEAAKAISDLSMDGSSSETISKNARKKELKMKQREEEKKRKEEEKVKQAAAVSSS
KVQKPMAGDDEDMDPTQYFENRVKYLAAQKAAGKNPYPHKFFVTLSILEYIEKYGALSNG
DHLEDVTVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADARSSDMDEAEFSRFHSGVK
RGDIVGVTGFPGKTKRGELSIFPKSFVVLSHCLHMMPRQKAGPGSDNANVKKTDVWVPGS
TRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKIISYIRSFLDNLDFLEVETPMM
NMIPGGAAARPFVTHHNDLNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTH
NPEFTTCEFYMAFADYNDVMELTEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPF
RRIDMIEDLEKMADLSIPKDLSSDEANKYLVDACLKFDIKCPPPQTTARLLDKLVGHFLE
EACVNPTFIINHPEIMSPLAKWHRSKQSLTERFELFVNKHELCNAYTELNDPVVQRQRFA
EQLKDRQSGDDEAMALDETFCMALEYGLPPTGGWGLGIDRLTMMLTDSQNIKEVLLFPAM
KPQDEPSSVQPPAQPSTQAV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgctgctgaagaagctgccaaagcaatctcggatttatccatggatggttct
tcatctgaaaccataagcaaaaatgctcggaagaaggagttgaagatgaagcagagggag
gaggaaaagaagcgcaaagaggaggaaaaagtaaagcaggctgctgctgtctcaagctcg
aaggtgcagaaacccatggctggtgatgatgaagatatggatccaactcaatactttgaa
aatagggtgaaatatcttgcagctcaaaaggctgctggaaaaaatccatatcctcacaaa
ttctttgttacactatctatccttgaatacatagagaaatatggagccttaagcaatggg
gatcaccttgaggatgtcacagtatcattggctgggcgaataatgagcaaacggtcatcc
tcttcaaagctatttttttatgatttgcatggtgatggtgctaaagttcaagttatggct
gatgcaaggagctcggatatggatgaggctgaattttctaggttccattctggtgtgaag
cggggtgatattgttggtgtcactggctttccaggaaaaaccaaaaggggggagctaagt
atttttccaaaatcttttgtagtcttatctcattgtctccatatgatgccaagacagaaa
gctggtcctggttctgataatgccaatgtgaagaaaactgatgtatgggtcccaggaagt
accaggaatcctgaaacatatattttgaaagatcaggaaactcgatatcgtcaacgttac
ctggatttgatgttgaatatggaggttcgacaaatattcaagacccgagctaagattatt
tcatacattagaagctttcttgacaatcttgatttcttggaggttgaaactccaatgatg
aacatgattcctgggggtgcagcggctcgtccatttgtgactcatcacaatgatctaaac
atgaagttatatatgcgtatcgctcctgaactctaccttaaggagctagttgttggtgga
ttagaccgagtttatgaaatcggaaaacaatttaggaatgagggaattgatttgacccat
aatcctgaattcactacatgtgagttttatatggcctttgcagactacaatgacgtgatg
gagctcactgagaaaatgttgagtggtatggtcaaggaacttacaggtggctacaaaatt
aaataccatgcaaatggcttggataaggatccaattgagattgacttcactccacctttc
aggaggattgacatgatagaggatttagagaagatggcagacctcagcatacccaaggat
ctctcgagcgatgaagcaaacaaatatttggtggatgcatgcttgaaatttgatatcaaa
tgcccccctcctcaaacaacggctcgtttgttggacaaacttgtggggcattttcttgag
gaggcctgtgtaaatcctactttcatcatcaaccatccagaaataatgagtcctttggca
aagtggcacagatcgaaacaaagcttgactgaacgttttgaattgtttgtcaacaagcat
gaactttgcaatgcttacactgaattgaatgatcctgtggtccaacgtcagcgatttgcc
gaacaactcaaggaccgacaatcaggtgatgatgaagcaatggctttggatgaaacattt
tgtatggctcttgagtatggattaccacccactggtggctggggattgggaattgatcga
cttacaatgatgttaacagattcacaaaatattaaggaagttcttctctttccagccatg
aaacctcaagatgagccttcttctgtccagcctcctgcacaaccttctacccaagctgtg
tag
DBGET
integrated database retrieval system
