Vitis riparia (riverbank grape): 117929692
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Entry
117929692 CDS
T07274
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
vri04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117929692
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117929692
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117929692
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117929692
03036 Chromosome and associated proteins [BR:
vri03036
]
117929692
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117929692
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117929692
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117929692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF929
DUF4187
Motif
Other DBs
NCBI-GeneID:
117929692
NCBI-ProteinID:
XP_034705963
LinkDB
All DBs
Position
14:complement(17200647..17240424)
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AA seq
539 aa
AA seq
DB search
MNMEIVSDVLSLDAELLQLPEVSPFALKSNPRFSEELFDQWLSLPETNRLVTSLLNDAKA
GVPLNVPGNSSSTNAAASNSLPSMFPAGSAPPLSPRSISGSPRVMKPRIGPSNLSSPLKL
ASEPVRELIPQFYFQNGRPPPNELKEQCLFRINQVFYDHLDGLQIHEFRSVAKDICKLPT
FLSTTLFRRIDVNFTGIVTRDAFVDYWVNGNMLTMDIATQIFKILKQPDLKYLTQVDFKP
VLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYMNRSGNGQLTLRELKRGNLIAAMQ
HADDEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQIPRKFTSKVEGKMGYEDFVYFILSEEDKTSEPSLEYWFKCIDLDGNGVLTRNEMQFFY
EEQLHRMECMAQEPVLFEDILCQIVDMIGPENESYITLRDLKGCKLSGSVFNILFNLNKF
MAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEEASNGSAEVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggagatagttagcgatgtgctgtctttggacgccgaattgttgcagctgccg
gaggtgtcgccttttgctctcaagtcgaaccctaggttctccgaggagctttttgaccag
tggctttcgcttcctgagactaaccgtctggtgacttcattgctgaatgatgcaaaggca
ggtgttcccttgaatgtccctggaaattcttcttcgacaaatgctgctgcaagcaactca
ttaccttccatgtttcctgctggcagtgcacctccactgtcaccaagaagtatatctggt
tctcctcgtgttatgaagccgaggattggcccttctaatttaagttctcctctgaaatta
gctagtgagcctgttagagaattgatacctcagttttactttcaaaatggccgcccacct
ccaaatgaactaaaggaacaatgtttgtttaggatcaatcaagttttctatgatcacttg
gatggactgcaaatacatgaatttagatcagttgctaaggatatttgcaagttgcctaca
ttcctctccactactcttttcagaaggattgatgttaatttcactgggattgttactagg
gatgcatttgttgattattgggtcaatggcaacatgttgacgatggatatagcaacccaa
atatttaaaattttaaagcaaccagatctcaaatacctcactcaggttgacttcaaacct
gtacttagagaacttttggcaactcatccagggttggaattcctacaaagtactcctgag
ttccaggaaagatacgctgaaactgtaatataccgaatattttactacatgaatagatct
gggaatggtcaacttaccctcagagagctaaaacgtgggaacttaattgctgcaatgcaa
catgcagatgacgaggaggacatcaataaagtgttgaggtacttctcttatgaacacttc
tatgttatatactgcaagttctgggagctggataccgaccatgattttttgattgataaa
gagaacctaatcagatatggtaaccatgcacttacctatcgaattgttgatagaatattt
tcccagattccaagaaagtttacgagcaaggttgaaggcaagatgggatatgaagatttt
gtctacttcatactgtcggaagaggataaaacatctgagcctagtcttgagtattggttc
aagtgcatagatttggatggaaatggagttctgacaaggaatgaaatgcaattcttttat
gaggagcagttgcatcgaatggaatgcatggcccaagagcctgtgctctttgaggatata
ttgtgtcagatagttgatatgattggtccagagaacgagagctatatcacgctgcgtgac
ttgaaaggttgtaaactttctggaagtgtcttcaatatccttttcaaccttaataagttt
atggcttttgaaactcgtgatccatttctcattcgtcaggagcgtgaaaatccaacattg
accgagtgggatcgctttgcacatagggaatatataaggctctcgatggaagaagatgtt
gaagaagcctcaaatggaagtgcagaagtttgggacgaatcactagaggctcccttctga
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