Vitis riparia (riverbank grape): 117929891
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Entry
117929891 CDS
T07274
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117929891
03036 Chromosome and associated proteins [BR:
vri03036
]
117929891
Transcription factors [BR:
vri03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117929891
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117929891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
117929891
NCBI-ProteinID:
XP_034706220
LinkDB
All DBs
Position
14:15962874..16089083
Genome browser
AA seq
1506 aa
AA seq
DB search
MDEEHEEVEDVESSSSDSFIDDLDNNESMTSGQDDGLHLEVTLTEEEIEELIAEFLDVES
KAAEAQESLEEESLSKLEIEVREELAQTLQGNDLETAVAEEMANFKEEWEAVLDELETES
AHLLEQLDGAGIELPSLYKWIESQAPNGCCTEAWKQRVHWIGSQVTGDTTESIIEAEKHL
QTDRPVRRRHGKLLEEGASGYLAKKLASDENREAVTENAEVDWCSFNKCFSDHASEDNTL
FGSEHWASVYLASTPQQAAVMGLKFPGVDEVEEIDDIDGNSSDPFVADAIANERAVDLSE
EQKKKFKKVKEEDDANIDRKLQLHLKRRRYRKRSTQETIQKEDRLAENILDNSVLLNDYS
QAVLREKTRGDGVSISNDNDDGACQSSKTEVSESLEMPDTLDKERPASNGNSSVLSGSVL
PDSTETKGFKRSHDNGELDVDNKRFRTVIIDSDDETHEVGNLSNSLVNNMTKMEGQSVLQ
ENEGDFVGAGSLPSKHMNGNFHCTACNKVAIEVHCHPLLKVIICGDCKCLIERKMHVKDP
DCSECYCGWCGRSNDLVGCKSCKTLFCITCIKRNIGEECLSDVKASGWQCCCCSPSLLQQ
LTSELEKAIGSSSLTVSSSDSDSDNSDEDINVAISSKRRRKKKIRRILDDAELGEETKRK
IAIEKERQERLKSLQVQFSEKSKMMNAASCNGNLSEDTSVEVLGDASKGYIVNVVREKGE
EAVRIPPSISAKLKVHQITGIRFIWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA
FLYTAMRSIDLGLRTALIVTPVNVLHNWRQEFIKWRPLELKPLRVFMLEDVSRERRAELL
AKWRAKGGVFLIGYSAFRNLSLGKNVKDRHMAREICYALQDGPDILVCDEAHMIKNTRAD
TTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHM
NSTSDDVKIMNQRSHILYEQLKGFVQRMDMSVVKNDLPPKTVFVMAVKLSSLQRKLYKRF
LDVHGFTNDKVSSDKIRKRCFFAGYQALAQIWNHPGILQLTKEEKDYARREDGVENFLAD
DSSSDDNIDYNTVLGAEKVRNKNEIQQGKVDSGLYQKGWWNDLLHENNYKEVDYSGKMVL
LLDILTMCADVGDKALVFSQSLSTLDLIEYYLSKLSRQGKKGKCWKQGKDWYRLDGRTEG
SERQKLVERFNDPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW
RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFDFGD
DENPDILPERGKEEEHTTNQNMTGQVGNSLKDKLSLSHGSCSSDKLMESLLVRHYPRWIA
NYHEHETLLQENEEEKLSKEEQDMAWEVYRRTLEWEEVQRVPLDESTFERKPAVSNAAPL
VTESISLSETKISRLRNNLVQRKCTNLSHMLTLRSQGTKVGCSTVCGECAQEISWEDLNR
DGRAVR
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaacatgaggaagtggaagatgtcgagagtagttctagtgattctttcatt
gatgatttagacaacaatgaatcaatgacatctggtcaagatgatggattgcatcttgag
gtcactttgactgaggaagaaatagaagagttaattgctgaattcttggatgttgagagt
aaggctgcagaggcccaagaatcacttgaagaggaatcactttccaaattggagattgaa
gttagagaagagttggcacaaacccttcaagggaatgatttggaaacggctgttgcagag
gaaatggcaaattttaaggaagagtgggaagctgtgcttgatgaacttgagactgagagt
gctcacttgttggaacaacttgatggggctggtattgaattaccaagtctctataagtgg
attgaaagtcaggctcctaatggttgttgcactgaagcttggaaacaaagggtacattgg
ataggatctcaggtgactggtgatactactgaatcaatcatagaagctgaaaagcatctc
caaactgacaggccagtgcgaagacgacatggtaaactattggaggagggtgccagtgga
tatctggcaaaaaaacttgctagtgatgagaacagagaggctgtaacagagaatgcagaa
gtggattggtgctctttcaacaaatgtttttctgatcatgcatctgaggataatacttta
ttcggcagtgagcactgggcttctgtgtacttggcaagtactccacagcaagcggcagtg
atggggctcaaatttcctggagttgatgaggtggaggagatcgatgatattgatggcaat
tcaagtgatccatttgttgcagatgccatagcgaatgaaagagctgtggatctttctgaa
gaacagaagaaaaaatttaaaaaggtgaaagaggaagatgatgcaaatatagatcggaag
cttcaacttcatttgaaacgtaggagatatagaaagagaagtacacaggaaaccattcag
aaagaagatcggttggcagaaaacatcttagacaattctgtgcttttgaatgactactct
caggctgttttgagagagaaaactcgtggggacggggtaagtatatctaatgataatgat
gatggtgcatgtcaaagttcgaaaactgaggtgtcggaaagtcttgaaatgcctgacact
cttgacaaagaaaggcctgcaagtaatggcaattcttcggtgctttctggctctgttttg
cctgattcaactgaaaccaaaggattcaagcgttcacatgacaatggggaacttgatgtt
gataataagaggtttcggactgttatcatagatagtgatgatgaaactcatgaggtgggc
aatctatccaattctcttgttaacaatatgactaagatggagggtcagtctgttttgcaa
gaaaatgaaggtgattttgttggtgctggttctcttccttcaaagcatatgaacgggaat
tttcactgcactgcttgtaataaagtggctattgaagtgcactgtcatcctcttctgaaa
gtaatcatctgtggggattgcaaatgtttaattgagagaaagatgcatgttaaggatcct
gattgctctgagtgttattgtggatggtgtggacggagcaatgacttggtaggttgtaag
tcatgtaaaacattattctgtattacgtgtataaagaggaacatcggcgaagaatgcttg
tcagatgtcaaagcaagtggctggcaatgttgttgctgctctccaagtcttctgcagcaa
ttgacttcggagttagaaaaagccattggatctagtagtctgacagtttctagctctgat
agtgattcagataattcagatgaagatatcaatgttgcaatcagctccaaacgaagaaga
aaaaagaaaattcggaggattcttgatgatgctgagttaggggaagagaccaaaagaaaa
attgcaatcgaaaaggaacggcaagaacgtctcaagtctctacaagtgcagttttctgag
aaatccaagatgatgaatgctgcaagttgcaatggtaatttatcagaggatactagtgtt
gaagttctaggtgatgcttcgaaaggttatatagtgaatgttgtgagggaaaaaggtgaa
gaagctgtgaggattcctccaagcatctctgccaaattgaaagtccatcagatcacaggg
atacgatttatatgggaaaatattatccagtccattagaaaagtgaaatctggtgataaa
ggtcttggttgcattctagctcacaccatggggcttggtaaaacttttcaggtgatagct
ttcttatatactgcaatgagaagtattgacttaggattaagaactgcacttatcgttaca
cctgtaaatgtgctgcacaattggcggcaggagttcataaaatggagacctttggaattg
aagcctcttcgtgtcttcatgttggaagatgtttcaagggagagaagagcagaattgctt
gcaaagtggagagctaagggtggtgtctttttaattggctatagtgcattcagaaactta
tcccttgggaagaatgtgaaagatcgccatatggctagagaaatttgctatgctctgcag
gatggaccagatatactggtctgtgatgaggcccacatgatcaagaacaccagggctgat
acaactcaagccttgaaacaagtgaagtgccagaggcggattgcattgactggatcacct
cttcaaaacaatctcatggaatattattgtatggttgattttgtaagagaaggattcctt
ggaagtagccatgaattccgaaaccgcttccaaaatcctatagagaatggacaacatatg
aactccacatcagatgatgtaaaaataatgaatcagaggtctcatatcctctatgaacaa
ctaaaagggtttgtccaaagaatggacatgagtgtggtcaagaatgacttgccccctaaa
actgtttttgtaatggctgtaaagctttcttccttacaacggaaattatacaaaagattc
cttgatgtgcatggcttcacaaatgacaaggtttctagtgacaagataaggaagagatgt
ttttttgctgggtatcaggccttagctcagatatggaaccatcctgggatcttgcaattg
acaaaagaagaaaaagactatgcaagacgtgaagatggtgttgagaattttcttgcagat
gacagctctagtgatgataatatagattacaatactgttcttggagcagagaaggtgagg
aacaagaatgagattcaacaaggaaaagtcgatagtggcttatatcagaagggttggtgg
aatgatcttctccatgaaaataattataaagaggttgattacagtggcaaaatggttttg
ctgcttgatatcctaaccatgtgtgctgatgtgggtgataaggctctggtttttagtcag
agcttatcaactctagatctgatagaatattatctttcaaaattatcacggcaagggaag
aaagggaaatgttggaagcaaggaaaagactggtacaggctagatggaagaacagagggc
tctgaaaggcaaaagctagtagagagatttaatgaccccttaaataaaagggtgaaatgc
actttgatatccacccgagctggatctttgggaatcaatcttcattctgctaaccgtgtc
atcattgttgatggatcatggaatccaacatatgatcttcaggctatatatcgggcttgg
aggtatggccaaactaagccagtgtttgcttaccgattgatggctcatggaactatggaa
gaaaaaatttataagcgtcaggtgacaaaggaaggcctggctgccagggtggtcgataga
caacaagtacataggactatctctaaagaggagatgttacatctctttgattttggtgat
gatgagaaccctgatattttacctgagaggggcaaagaggaagagcatacaaccaaccaa
aatatgactggtcaagttggaaattcgctaaaggacaaattatctctttctcatggaagc
tgctcttctgacaagttaatggaaagtttacttgtcaggcattatccacggtggattgct
aactaccatgaacatgagacccttctgcaagagaatgaagaggagaagctatcaaaagag
gagcaagacatggcttgggaagtatatcggagaactttagaatgggaagaagtacagcga
gtaccccttgatgagtctacatttgagcgaaaaccagctgtttcaaatgcggcccccctt
gtaacagagagcatcagtctctcagagaccaagattagtagattgaggaataatttggtg
cagcggaaatgcaccaacctttctcacatgctgactcttagaagtcagggcacaaaagtt
ggttgcagtactgtatgtggggaatgtgcacaagaaataagctgggaggaccttaatagg
gatggcagggcagtaaggtga
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integrated database retrieval system
