Vitis riparia (riverbank grape): 117929975
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Entry
117929975 CDS
T07274
Name
(RefSeq) chaperone protein ClpB3, chloroplastic isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vri03110
]
117929975
Chaperones and folding catalysts [BR:
vri03110
]
Heat shock proteins
HSP100
117929975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
AAA_22
nSTAND3
AAA_14
AAA_18
IstB_IS21
Zeta_toxin
AAA_7
TniB
Mg_chelatase
AAA_28
AAA_25
AAA_24
NACHT
ABC_tran
ResIII
NBD_SMAX1
Torsin
DUF2524
Motif
Other DBs
NCBI-GeneID:
117929975
NCBI-ProteinID:
XP_034706310
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All DBs
Position
14:225157..233364
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AA seq
976 aa
AA seq
DB search
MAATTSFSRVHLRFPTNCSNGPALSPHPRPSLNLSARRRSLKALNSLRLKQNDVFLSKRF
AGSGKCPRSFVVRCDASGGRITQQDFTEMAWQAIVSSPEVAKENKHQIVETEHLMKALLE
QKNGLARRIFSKAGVDNTRLLDATDKFIQRQPKVIGESAGSMLGRDLESLIQRAREYKKE
YGDSFVSVEHLVLAFAQDQRFGKQLFKDFQISQKALKSAIEAIRGRQQVIDQDPEGKYEA
LEKYGKDLTAMAKAGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLA
QRIVQGDVPQALMNRKLISLDMGALIAGAKFRGEFEDRLKAVLKEVTESDGQTILFIDEI
HTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQ
PTVEDTISILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAK
LKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASKDRLSRLEAELSLLKEKQAELSE
QWEHEKSVMTRLQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLENAEKEL
DEYMKSGKSMLREEVTGNDIAEIVSKWTGIPVSKLQQSEREKLLHLEEELHKRVVGQDPA
VRSVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSE
YMEKHAVSRLIGAPPGYVGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDD
GRVTDSQGRTVSFTNTVLIMTSNVGSQYILNMDNETLPKETAYETIKQRVMDAARSIFRP
EFMNRVDEYIVFQPLDRDQISSIVKLQLERVQLRIADRKMKLQVTETAIQLLGSLGYDPN
YGARPVKRVIQQNVENELAKGILRGEFKDEDTVLIDTEVTAFSNGQLPQQKLILRKLESD
SDTPAAEGQEAFSQTI
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaacgacgtcgttttcccgtgttcaccttcgttttcccaccaactgctccaac
ggacccgctctttctcctcacccccgcccctctctcaacttgtctgcaaggcgtaggtct
ttgaaagccctaaattcgttgaggttgaagcaaaacgatgtctttctttccaaacggttt
gctgggtcgggtaagtgtcccaggtcttttgttgttcgatgcgatgcttccggtggaagg
atcactcaacaagatttcacagagatggcttggcaagcaattgtttcttcaccagaagtg
gcaaaggagaacaagcatcagatagtagagacagagcatttgatgaaggctctgctggag
cagaagaatggacttgctcgcagaatcttctcgaaggctggggttgataatacccgtctc
cttgatgccactgacaagttcattcaacgtcagcctaaggttattggtgaatcagctggt
tcaatgttaggacgggacttagaaagcttgattcagcgggccagggagtacaagaaagag
tatggtgattcctttgtgtcagttgagcacttggttcttgcctttgcacaagatcaacgt
tttgggaagcaactgtttaaggattttcaaatctcccagaaagccttaaaatctgcaatc
gaggccataagaggacgccaacaagtcattgatcaagatcctgaagggaagtatgaagca
cttgagaaatatggaaaagatttgacagccatggcaaaagcaggaaagcttgacccagta
ataggaagagatgatgaaatacggaggtgcatccagattctctccaggagaacaaagaac
aatcctgtgctaattggtgagccaggtgttggaaaaactgcaatttctgaagggcttgct
cagagaatcgtgcaaggggatgtgcctcaagctttgatgaatcgtaagcttatatctctt
gacatgggtgcactcatagctggggcaaaatttcgaggggaatttgaggataggctgaag
gctgtactcaaggaagtaacagaatcagatggccagactatcctttttattgacgagatc
cacacagttgttggagcaggtgctacaaatggtgcaatggatgcgggcaatctactgaaa
ccaatgcttggtcgtggagagttgcgatgtattggtgcaacaacactggatgagtatcgg
aaatatattgagaaagatccagcattggaacgtcgtttccagcaagtttatgtggatcaa
cctacagtggaagatacaatttccatacttcgtgggttgcgggaaagatatgaactgcat
catggtgtccgcatctctgacagtgcacttgtggaggcggcaattctgtctgatcgttac
atcagtggtcgctttttacctgacaaagctattgacctagttgatgaagcagctgctaaa
ctgaagatggaaattacatcaaaacccactgcacttgatgagatcaaccgttctgtactg
aagctggagatggaaaggctgtctcttacaaatgatacagataaagcttcaaaagatagg
ttgagtcgccttgaggctgagctgtctctgttaaaagagaaacaagcagagctgagtgag
caatgggagcatgaaaaatcagttatgacacgccttcagtcaatcaaagaagagattgac
agggtgaatcttgagattcagcaggctgagcgggagtatgaccttaatcgtgctgctgaa
ctcaagtatgggagcctgaactctttgcagcgtcaacttgaaaatgcggaaaaagagttg
gatgagtatatgaaatctgggaaatccatgctaagagaagaggttacagggaatgatatt
gctgaaattgtcagtaaatggactggtatccctgtttccaagctacaacaatcagagagg
gagaaactattacatttggaagaagagctacataaacgtgtcgttggtcaagatcctgca
gtgagatcagtagctgaggccatccagcggtcccgagcaggtctctctgatcctcaccgc
ccaattgctagtttcatgttcatgggtcctacaggtgttgggaagacagagctagccaag
gcccttgcttcctacatgttcaacactgaagaagcccttgtgcgaattgatatgagtgag
tacatggaaaaacatgcagtttcaagattgataggggcaccgcctggttatgttggttac
gaggaaggagggcagttgacagagacagtccgcaggaggccatatgcagttattctgttt
gatgaaatagaaaaggcccattcagatgtgttcaatgtgtttcttcagattctggatgat
gggagggtgactgactcacagggtcgcactgtgagctttaccaacactgtcctcattatg
acttcaaatgtgggttcacagtacattctcaatatggacaatgagaccttaccaaaagag
acagcttatgaaactattaagcagagggtaatggatgctgcaagatcaattttccgtcct
gagttcatgaaccgagttgatgagtacatagttttccagcctctggaccgtgatcagata
agcagtattgtcaagttacagttggaacgggtacaattgagaatagcagaccggaagatg
aaactccaggtgactgaaacagcgattcagctgctaggaagtcttgggtatgatcccaat
tatggtgctaggccagtcaagcgggtgatccagcaaaatgttgaaaatgaacttgccaag
ggcatattaaggggtgagtttaaggacgaggacacagtgttgattgacacagaggtcaca
gcattttccaatggccagcttccccagcaaaagctaatcctgagaaaactggagtctgat
tcagacacaccagctgcagaaggccaagaagctttttcacaaaccatctga
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