Vitis riparia (riverbank grape): 117929993
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Entry
117929993 CDS
T07274
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04120
Ubiquitin mediated proteolysis
vri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117929993
04120 Ubiquitin mediated proteolysis
117929993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117929993
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117929993
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
U-box type E3
117929993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
117929993
NCBI-ProteinID:
XP_034706334
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All DBs
Position
14:289415..297448
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AA seq
1037 aa
AA seq
DB search
MATKKPQLSPDEIEDIILGKIFLVSLNDSMESDSRIVYLEMTAAEILSEGRPLKLSRDLM
ERVLIDRLSGNFPGAEPPFPYLIGCYRRAYDEGKKIASKKDKNLRSELELVVKQAKKLAV
SYCRIHLGNPDMFSNWDSGANDSAVSPLLPLIFSEVSSSVDGFGGSSIGCPPGFLEEFFR
DSDFDSLDPIFKGLYENLRSIVLKVSALGNFQQPLRAFLYLVRFPFGAKSLVSHRWWIPQ
GAYMNGRVIEMTSILGPFFHVSALPDRGIFQGQPDVGQQCFSEASTRRPADLLSSFTTIK
TVMNSLYDGLAEVLLSLLKNADTRESVLKYLAEVINKNSSRAHIQVDPLSCASSGMFVSL
SAVMLRLCEPFLDLTKMDKIDPKYVFYSTRLDLRGLTALHASSEEVAEWINKDSPGGTEG
SRQYSDGESRLLQSQEATSSGSNAHGPSFLHNAKPVPISSEKAKYSFICECFFMTARVLN
LGLLKAFSDFKHLVQDISRCEDSLATLKAVQGQAPSPELEADIARFEKEIELYSQEKLCY
EAQILRDGTLLQHALSFYRLMVVWLVRLIGGFKMPLPSTCPMEFACMPEHFVEDAMELLI
FASRIPKALDGVLLDDFMNFIIMFMASPNFIRNPYLRAKMVEVLNCWMPRRSGSSATATL
FEGHRLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQ
IAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPATERQERT
RLFHSQENIIRIDMKLANEDVSMLAFTSEQITVPFLLPEMVERVANMLNYFLLQLVGPQR
KSLSLKDPEKYEFRPKQLLKQIVHIYVHLARGDTQKIFPTAISKDGRSYNEQLFSAAADV
LRRIGEDGRIIQEFSELGARAKVAASEAMDAEAALGEIPDEFLDPIQYTLMKDPVILPSS
RITVDRPVIQRHLLSDNTDPFNRSHLTSDMLIPNIELKARIEEFIRSQELKKHAEVLTMQ
QSKAAMQTTTGEMTLID
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaagaaaccccaattgtctccggacgaaattgaggatataattctggggaaa
attttcttggtttcgttgaatgattccatggaaagcgattcaagaattgtatacttggag
atgactgcagctgaaattctgagtgagggcaggccgttgaagctttcacgggatttgatg
gaaagggtgttgatcgatcggctttccgggaacttccctggtgccgagcctccgtttccg
tacctaatcgggtgttatcggcgagcatatgatgagggaaagaagattgcatcgaagaaa
gacaagaatttgaggtctgaactggaattggtagtgaagcaagcaaagaaattggcggtt
tcctattgccggattcatttaggcaatccggatatgttttccaattgggattccggtgca
aatgattcggcagtgtcgccactgttgccgttgattttctccgaagtttctagcagtgtt
gatggatttggagggagtagcattgggtgcccacctgggttcttggaggagtttttccgg
gactcagatttcgatagtttggacccgattttcaaagggttgtacgagaacttgagaagt
atagtgctgaaagtgtctgcactggggaattttcagcagcctttaagggctttcttgtat
ttggtcaggtttccgtttggtgccaaatcactggtgagtcaccgatggtggattccccaa
ggcgcgtatatgaatgggcgggttattgagatgaccagcattttgggtcccttctttcat
gtcagtgctttgccggatcggggtattttccagggtcagcctgatgttggtcagcaatgc
ttctctgaggcatctactcgtcgtccagctgatttattgtcttcattcaccactatcaag
acagtcatgaatagcttatatgatggcttagccgaagtccttctctctctccttaaaaat
gctgatacacgtgagagtgttctgaagtatcttgcagaggtgatcaataaaaactcatca
agggctcatatacaggttgatcccctatcttgtgcaagttcaggcatgtttgtcagtctt
agtgcagtcatgcttcgactctgtgagccattcttagatttaacaaaaatggacaaaatt
gatcccaaatatgtattttacagtacccgattggatctgagaggattgactgctctacat
gcatcatctgaggaagttgctgaatggattaataaagatagtcctgggggaacggagggc
tctaggcaatatagtgatggcgaaagccgcttgctacaatctcaagaagccaccagttct
ggcagtaatgctcatggaccttctttcctccataatgccaagccagtgccaatttctagt
gaaaaagctaaatactcatttatctgtgaatgcttctttatgactgcaagagtactgaac
ttgggcctgctaaaagcattttctgactttaagcatctagttcaggatatttcaagatgt
gaagattcccttgccacgttgaaggccgtgcagggacaggcaccttctccagaactagag
gcggatatagctcgctttgagaaagaaattgagttgtattcacaggaaaagctatgttat
gaagctcagatactcagggatgggactcttcttcagcacgcactgtctttctacaggtta
atggtggtttggttggttcgcctcataggtggttttaagatgcctctaccatcaacttgc
cctatggaatttgcttgtatgcctgagcattttgtggaagatgccatggaattgcttatt
tttgcttctcgaattcctaaagctttggatggggtcttgctggatgattttatgaacttc
attatcatgttcatggcaagtccaaattttataagaaacccatatctgagggcaaaaatg
gttgaagtcctgaactgctggatgccccgtaggagtggttcatctgctacagctactctc
tttgaagggcaccgattgtctcttgagtatcttgtgagaaatctgctgaagctttatgtt
gatattgagttcacgggttctcacacacagttctatgacaagtttaacattcgtcataat
attgccgaacttctagaatacctgtggcaggtcccaagtcaccgtaatgcttggagacag
attgctaaagaagaagaaaagggtgtctatctgaatttcttgaacttcctgatcaatgat
agcatctatctccttgatgagagtcttaacaaaattcttgaactcaaagagttggaagct
gagatgtctaacactgtggaatgggagcgcagaccagctacagagaggcaggagagaacg
cgactattccactcccaagagaatattatccggattgatatgaagttggcaaatgaagat
gtgagtatgctggcatttacctcggagcagattacagttcctttcctacttccagagatg
gttgaaagggtggccaatatgcttaattactttttgttacaacttgtggggccccaaagg
aaatctcttagcctaaaagaccccgaaaagtacgagttccgcccaaaacaactacttaag
cagatcgtccacatatatgttcatctggcaaggggtgatacacagaagatattcccaact
gcaatctcaaaggatgggcgatcttacaatgagcagttatttagtgctgctgcagatgtc
cttagaagaattggtgaggatggaaggataatacaagaattttctgagcttggtgctaga
gccaaagtagcagcttctgaggccatggatgccgaagctgcccttggagagatacctgat
gaattccttgatccaattcaatacacattaatgaaggacccagtgatcttaccttcttca
agaatcacagtagaccggcctgtcattcaaaggcatcttctaagcgataatactgaccca
tttaatcgatcccatcttacttcggatatgctcatcccaaacattgaactgaaggcgaga
atagaagaattcatcagatcccaagaattaaagaagcacgcagaagtcttaaccatgcaa
caaagcaaagcagcaatgcaaactaccacaggtgaaatgactttgattgattag
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integrated database retrieval system
