Vitis riparia (riverbank grape): 117930060
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Entry
117930060 CDS
T07274
Name
(RefSeq) chaperone protein ClpC2, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vri03110
]
117930060
Chaperones and folding catalysts [BR:
vri03110
]
Heat shock proteins
HSP100
117930060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
nSTAND3
AAA_22
AAA_16
Sigma54_activat
ResIII
RuvB_N
TniB
NACHT
AAA_14
AAA_7
IstB_IS21
AAA_18
Mg_chelatase
Zeta_toxin
RNA_helicase
TIP49
AAA_25
AAA_23
AAA_24
NBD_SMAX1
Parvo_NS1
NB-ARC
DUF5906
SLFN-g3_helicase
Torsin
TMEM117
Motif
Other DBs
NCBI-GeneID:
117930060
NCBI-ProteinID:
XP_034706396
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Position
14:complement(5321359..5323511)
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AA seq
586 aa
AA seq
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MEKLEQKTFKTDMLNIYGRDLTKLAEQNKLDPVMGRQMQIERVMQILCKRRKNNPCLIGD
PGVGKTMIAEGLAQDIAKSRAPFKLLQKKVFSLDISRLIAGSSNRGEFEERLMNVVDEVK
GSEGEIILFIDEAHTLVGAGSGCQALDAANILKPALAKGELKCIAATTVDEYRKYVEKDP
ALKRRFQPVDVSEPSVEEAIEILKGLSKKYEAHHHVQYSDNALIAAARLSSQYISEYYLP
DKAIDLIDEAGARVQLHQPQMSTNIPTITEMDIRHIISSRTGIPLEKLSAKELMKLVDME
ETLRESIIGQEDAVKAICRALRRDGAGIRDPTRPIASFLFTGPTGVGKTELAKLIALEYF
GSKEAMVRIDMSEYMEKHTVPRLCGSPPGYVGHDEGGQLTEAVRRRPYNLVLFDEIEKAH
RDVMNVMLQILDDGRLTDGKGRTVDFKNTLIIMTSNIGGSLITQTKIQLGFEQVKNLVAE
ELKKNFLPEFLNRLDEVIVFKQLSKPQLREIVDIRLKEVYKRFEEAKKINLEVTEELKEK
LVEEGFSPGYGARPLRRAIVSLLEDKVADMILEGTIVEGDTVSIGI
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcttgagcagaagacttttaagaccgacatgcttaacatatatggcagagac
ttgaccaaactggctgaacagaataaattagacccagtaatgggacgccaaatgcagata
gagcgagttatgcagattctgtgcaagagaagaaaaaataacccatgtctcattggtgat
cctggtgttgggaaaactatgattgcagaaggacttgcgcaggacattgcaaagtccaga
gccccattcaaactcttgcagaagaaggtattctctttggacataagccgtctcattgca
ggatcatcaaatagaggagaatttgaagaaagattgatgaatgtggttgatgaggtgaaa
ggaagtgaaggagaaataatactcttcatagatgaagcacacacactggttggcgcagga
tctggatgccaggcgttagatgcagctaacatattgaaaccagcacttgccaagggagag
ctaaagtgcattgctgctacaaccgtagatgaatacaggaagtacgtcgaaaaagacccg
gctttgaagaggcgtttccagccagtagatgtctccgagccatctgttgaagaggccatt
gagattctgaaaggtctaagcaaaaagtatgaagctcaccaccatgtccagtattcagac
aatgcattaatcgctgctgcacgtttgtcaagccaatacatcagtgaatactaccttcct
gacaaagctatagacttgattgacgaggctggggctcgtgtccaacttcatcaaccacaa
atgtctaccaatattcccaccatcacagagatggacatacggcatatcatctcttcccgg
actggaatccccctagagaaactttctgctaaagaattgatgaagctcgttgacatggaa
gaaacactcagagaaagtattatcggccaggaggatgctgtcaaagcaatatgtcgggcc
cttcgcagagatggtgccggcataagggaccccacacgcccaatagcaagcttcttattc
acgggccctactggtgttgggaaaacagaacttgctaaattaattgctctagaatacttt
gggtccaaagaagcaatggtgaggatagatatgagcgaatacatggaaaagcacacggtg
ccgagactgtgtggctcgccaccaggctacgtcggccacgatgaaggaggccagctgaca
gaggccgtccggcgtcggccgtacaatttagttctgtttgatgagattgaaaaagctcat
cgagatgtgatgaatgtaatgcttcagattctggacgatggacggctaacagacggcaaa
ggccgaacagttgatttcaagaacacccttatcataatgacatcaaatattggaggcagc
ctgattacccagacaaaaattcaactaggatttgagcaggtcaaaaacctagtagctgaa
gaattgaagaaaaatttcctgccggagttcttgaacaggttagacgaagtgattgtgttc
aagcagttgtcaaagcctcagctgagggagattgtagatataagactgaaagaagtgtat
aaaagatttgaagaggccaagaaaataaatttggaagtaactgaggagctgaaggagaag
ctagttgaagaaggattcagcccggggtatggagcaaggccattgagaagggccattgtt
agtctcttggaagacaaggtggctgatatgatcctcgaaggaaccattgtcgagggagat
acagtgtcaataggcatataa
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