Vitis riparia (riverbank grape): 117930090
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Entry
117930090 CDS
T07274
Name
(RefSeq) chloride channel protein CLC-b
KO
K05016
chloride channel 7
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117930090
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117930090
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vri04040
]
117930090
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117930090
Membrane trafficking [BR:
vri04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117930090
Ion channels [BR:
vri04040
]
Chloride channels
Chloride channel (CLC)
117930090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
117930090
NCBI-ProteinID:
XP_034706433
LinkDB
All DBs
Position
14:complement(4548127..4554781)
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AA seq
805 aa
AA seq
DB search
MSLQFSIALMEEDPSQVAETTTTTTTTTTTTTSSVEGVGEGEERDLESNPLNQPLLKRSR
TLSSNPLAIVGAKVSHIESLDYEINENDLFKHDWRSRSSAQVLQYIFLKWSLAFLVGLLT
GLIATLINLAVENIAGYKLLAVSGLVEKKRYLTGFIYLTTANFVLTLFAAFLCVCFAPTA
AGPGIPEIKAYLNGVDTPNMFGASTLIVKIFGSIGAVSAGLDLGKEGPLVHIGSCIASLL
GQGGPENYRIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRS
ALLWRTFFSTAVVAVVLRAFIEYCNSGKCGLFGRGGLIMFDVSDVTVTYHAMDIVPVALI
GLIGGVLGGLYNHLLHKVLRVYNLINQKGKIHKVLLSLSVSLFTSICLYCLPFLATCSPC
DSSITETCPTNGRTGNFKQFNCPDGYYNDLASLLFTTNDDAVRNIFSTNTATEFHPLSLL
IFFGLYYILGLITFGIAVPSGLFLPIILMGSAYGRLLGITMGSYTKIDQGLYAVLGAASL
MAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKSVGDCINPSIYDIILHLKGLPFLD
ANPEPWMRNITVGELADAKPPVVTLRGVEKVARIVDVLRNTTHNGFPVVDEGVVPRVGLA
IGATELHGIVLRAHLVKVLKKKWFLQERRRTEEWEVREKFTWIELAEREGKLEEVAVTND
EMEMYVDLHPLTNTTPYTVVESMSVAKAMVLFRQVGLRHMLIVPKYQAAGVSPVVGILTR
QDLRAYNILTAFPHLAKSKEREKGN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcaattttccattgccttgatggaggaagatccaagccaggttgcagaaaca
acaaccaccaccaccaccaccaccaccaccaccacctcaagcgtggagggagtaggagag
ggggaagagagggacctggaaagcaatccactgaaccagccactgctcaagagaagccga
acactctcctccaatcctctggccatagttggggccaaggtctctcatatagagagcttg
gactatgagatcaatgagaatgacctcttcaagcatgattggagaagcagatcatcagcc
caagtgctgcagtatatattcttgaaatggtcgctggcattccttgttgggctgctcact
ggcctgattgccaccctcatcaatcttgctgtagagaatatcgccggttacaagcttcta
gctgtgtctggcttagtagagaagaaaaggtatttgacaggattcatctatttgacaacg
gccaatttcgtattgactttgtttgctgctttcctgtgtgtgtgctttgcacctactgcg
gctgggcctggtataccagagatcaaagcttatctcaatggagtagatactcccaacatg
tttggtgcctccacattgattgtcaagatatttggaagcataggagctgtctctgcaggc
ctagatctggggaaagaagggcctctagtgcatattggtagctgcattgcttccctacta
ggccagggaggacctgaaaattatcgtataaaatggcgctggctccgctactttaacaat
gaccgtgacagacgtgatctcatcacatgtggggcttcttcaggggtttgtgcagctttc
cgggctccagttggtggtgtcctgttttctctggaagaagtggcaacatggtggaggagt
gccctcctctggagaactttcttcagcacagcggttgtggccgtggtacttagagctttc
attgaatattgtaattctgggaaatgtgggcttttcgggagaggaggactcatcatgttt
gatgtgagcgatgttactgtgacataccatgccatggatatcgtccctgttgcattaatt
ggattaattggtggtgtgttgggaggcctttacaatcaccttctccacaaggtcctgagg
gtctacaatctcattaatcagaagggaaaaatacataaggttcttctgagtctgagtgtc
tcactattcacctcaatttgcttgtattgcttgcctttccttgccacttgctcaccttgt
gattcctcaatcactgagacctgccccaccaatggacggactggcaacttcaagcaattc
aactgccccgatggctactacaatgacctagccagtctcctcttcaccaccaatgatgat
gcggttcgaaacatcttctctactaacactgcaacagagttccaccccctttccctctta
atattcttcggactctattatattctgggcctgattacctttggtattgctgtaccatct
ggcctcttcctccccatcatcttaatgggttcagcttatggccgcttgcttggcattacc
atgggctcctacacaaaaattgaccaagggctttatgctgttcttggtgcagcctccctg
atggctggttcaatgaggatgacggtttccctctgtgtcatattccttgaactcacaaac
aatctgctcttactacccataacaatgattgtcctcctaatagccaaaagtgttggtgat
tgcatcaacccaagcatttatgacataatactgcacctcaaaggcctgcctttcttggat
gcgaatcctgagccatggatgagaaatataactgttggggagcttgcagatgccaagcca
ccagtagttacccttcgtggagtggaaaaggtagcccgcattgtagatgtcctgagaaat
accacgcacaatggtttcccagtggtagatgaaggggtggtaccgcgggttggcctggcc
ataggggcaactgaactgcatggaattgtactaagagcacaccttgttaaagtgctgaag
aagaagtggttcctgcaagagagaaggagaacagaggagtgggaagtgagagagaaattc
acctggattgaactggccgagagggagggaaagttagaggaagtggctgtgacaaatgat
gaaatggaaatgtacgttgatttgcatcctctgaccaacacaaccccttatacagtggtg
gaaagcatgtcggtggcaaaagcaatggtgctcttcaggcaggtgggactccggcatatg
cttattgtacccaagtatcaagcagctggggtgtctccagtagttgggatcttgaccagg
caggatttgagagcctacaacattttgacagcctttccccatctagcaaaatccaaggaa
agggaaaaggggaactga
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