Vitis riparia (riverbank grape): 117930127
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Entry
117930127 CDS
T07274
Name
(RefSeq) pleiotropic drug resistance protein 3-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117930127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117930127
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117930127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC2_membrane_3
AAA_21
ABC_trans_N
AAA_16
AAA
RsgA_GTPase
AAA_25
AAA_29
AAA_22
AAA_28
Rad17
RuvB_N
AAA_5
AAA_11
TIP49
Motif
Other DBs
NCBI-GeneID:
117930127
NCBI-ProteinID:
XP_034706490
LinkDB
All DBs
Position
14:complement(29391890..29401031)
Genome browser
AA seq
1448 aa
AA seq
DB search
MAQLVGTDEIESFRIELTEIGRSLRSSFRRHTSSFRSSSASLKDDAVEEDDLQWTEIERL
PTFERLRSSLFDEYDDGSRVDGEGKRVVDVTKIGAPERRMFIEKLIKHIENDNLRLLQKI
RKRTDKVGVKLPTVEVRYKNLRVEAECEVVHGKPLPTLWNSLKSIPSDFTKLLGLGSHEA
HISIINGVSGVIKPGRMTLLLGPPGCGKTSLLLALSGNLDKSLKVTGEVSYNGYKMEEFV
PQKTSAYISQYDLHIPEMTVRETIDFSARCQGVGSRAETMLEVSRREKQAGIVPDPDIDT
YMKAISVEGLKRTLQTDYILKILGLDICADTMVGDAMRRGISGGQKKRVTTGEMIVGPTR
ALFMDEISNGLDSSTTFQIVAYLRQLVHIIDATILVSLLQPAPETFDLFDDIILMAEGII
VYHGPCSHILEFFEDCGFRCPERKGVADFLQEVISRRDQAQYWYHTEQAHGYVSVHTFSR
KFKESPFGKKLEEKLSKPFDKSHSHKNALSFSKYSLSKWELFRACMSREFLLMKRNSFIY
VFKSTQLVIIAAITMTVFLRTRMDVDIIHANYYLGSLFYALVILLVDGFPELSMTVSRLP
VFYKQRDLCFYPAWAYTIPATILKIPLSFVESLVWTSLTYYVIGYSPEFGRFLRQFILFF
AVHLSSVSMFRFFASVSRTMVASATAGSFAILLVLLFGGFIIPQPSMPDWLKWAFWISPM
TYGEIGLAVNEFLAPRWQKTLSTNTTLGRETLENRGLNFDGYLFWISLAALFGVTIIFNI
GFTLALSFLQAPGKSRAIISHEKLSQLQGRDQSTNGAYEEEESKNPPPKTTKEADIGRMV
LPFQPLTVSFQDVQYYVDTPVEMRQKGFAQKKLHLLHDVTGSLRPGVLTALMGVSGAGKT
TLMDVLAGRKTSGTIEGEIRIGGYPKVQETFARISGYCEQTDIHSPQITIEESVIFSAWL
RLSPQIDSKTKAEFVNEVLETIELDGIKDALVGLPGVGGLSTEQRKRLTIAVELVSNPSI
IFMDEPTSGLDARAAAVVMRAVKNVVDTGRTIVCTIHQPSIDIFEAFDELILLKTGGHLI
YCGPLGQHSSRVIEYFEGIPGVPKIRNNYNPATWMLEVTSTSAEAELGVDFAQIYKDSAL
YENNKELVKQLSIPPHGSEDLHFPTRFARNGWSQFKSCLWKQHLSYWRSPSYNITRTMHM
LVASLLFGILFWKQGKELNNQQGVFNVLGSMYVAVIFLGINNCSTVLPHVTNERTVLYRE
KFAGMYSSWAYSLAQVTIEIPYLFIQTLIYVIITYPMIGYYSSVYKIFWYFYAMFCTLLY
FNYLGMLLVAMTPSFPVASILSSAFYTIFNLFAGFLIPQPQVPKWWLWLFYLTPTSWSIT
GMLTSQYGDIHKDILVFGETKTVATFLEDYYGFHHDRLAVVAVILIAFPLAFAFLFTYCI
QRLNFQRR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttggttggaacagatgaaatagagtcatttaggattgagttaacagagata
ggaagaagcctaagatcatcatttaggcgtcacacctctagtttcagaagcagttcagca
tctttaaaggatgatgcagttgaagaggatgatttacagtggactgaaattgagaggcta
ccaacatttgaacggttgcggtcatctttgtttgatgagtacgatgatggaagtagagtt
gatggtgaaggaaaacgggtggttgatgttaccaagattggagctccagaaaggcggatg
ttcatagagaagctcatcaaacatatagagaatgataaccttcggttgttgcagaaaatc
agaaagagaacagacaaagttggagtaaaactgcccactgtggaggtgagatataagaat
ctgcgtgtggaagcagagtgcgaggtagttcatggaaagccccttccaactctatggaat
tctcttaaaagcatcccttctgattttactaagttgctaggtttggggtcccatgaagcc
catataagcatcattaatggtgtcagtggtgttataaagcctggaaggatgactctgctg
cttgggcccccaggatgtgggaagacttccttgttattagcactctcagggaatctagac
aagtctctcaaggttacaggggaagtctcttacaatgggtacaaaatggaagagtttgtg
ccccaaaaaacttctgcctatattagccaatatgatctgcacattcctgagatgactgtg
agagaaacaattgatttttcggcccgttgtcaaggtgttggaagcagagcagagactatg
ttggaggtaagcagaagggagaagcaagcaggaatagttccagatccagatatagatact
tatatgaaggcaatttctgttgaaggactaaagagaacccttcagacagactacattcta
aagattcttggactggatatctgtgctgacacaatggttggagatgccatgagaagaggc
atctctggtggtcaaaagaaaagagtgactacaggggagatgattgtagggcctacaaga
gctctctttatggatgaaatatcaaatggtctggacagttccacaacatttcagatagtt
gcttatcttcggcagctggtgcatatcatagatgctaccatactggtttcacttcttcag
ccagctcccgaaacctttgatctctttgatgacataatattgatggcagaagggataatt
gtgtatcatggaccctgtagtcatattctagaatttttcgaggactgtgggttcaggtgt
cctgagaggaaaggggtggctgacttcctccaggaggtcatctctagaagagatcaagca
cagtactggtaccacactgaacaagctcacggttatgtctctgtgcatacattctcaagg
aaattcaaggagtctccttttgggaagaagctagaagagaagctctctaagccatttgac
aagtcccacagccataagaatgctctatcttttagcaagtattctctttccaaatgggaa
ctcttcagagcctgcatgtcaagggaatttcttcttatgaagagaaattcttttatatat
gtattcaaatcaactcagcttgtcatcatcgctgccatcaccatgacagttttcttgcgt
actcggatggatgttgatatcattcatgcaaactactatcttggctccttgttctatgcg
cttgttatacttctagttgatgggttccctgagttgtccatgactgtttcaagacttcca
gtcttctacaaacagagggacttgtgcttttatccagcttgggcttacacaatcccagct
actattctaaaaattcctctttcctttgtggaatctctggtttggacatctcttacttac
tatgtcattgggtacagtcctgagttcgggcggttcctccgtcagtttattctatttttt
gctgtgcacttgtcatcagtatccatgttccgtttcttcgcttcagtctccaggactatg
gttgcttctgcaacagctggtagttttgcaatattattagtcctattatttggtggcttc
attatcccacagccctctatgccagattggttgaagtgggcattttggatatccccaatg
acatatggagagataggccttgcagtaaacgaatttctagctccgcgatggcaaaagaca
ctgtccacaaacacaacactagggcgtgagacacttgaaaatcgggggctgaactttgat
ggataccttttctggatatcacttgctgcattatttggagttacaataattttcaacatc
ggattcaccttggccttgagttttttacaggctcctggaaagtctcgtgctattatatca
catgaaaagctatcccaacttcaaggaagggatcaatccaccaatggtgcatatgaggaa
gaagagtcaaaaaatcctcctcctaaaactaccaaggaggctgatataggaaggatggtt
ttgccttttcaacccctgacagtatcattccaggatgtgcaatactatgtagacacacct
gtggaaatgagacaaaagggtttcgctcagaaaaaactccatcttcttcatgatgttact
gggtcattgaggcctggtgtcctcacagcattgatgggagttagtggagctggaaaaaca
actcttatggatgttcttgctggaagaaaaactagtggcaccattgaaggagagattaga
attggagggtatcctaaggttcaagaaacatttgctaggatttcaggctactgtgagcaa
actgacatacattctccacaaattactatagaagaatcagtgattttttctgcttggctt
cgtctgtctcctcagattgattcaaaaactaaagctgaatttgtgaatgaagtgcttgag
accattgagcttgatggaatcaaagatgctttagtaggtctgcctggtgttggtggttta
tcaactgagcaacgaaagcgtctgacaatagcagtggagcttgtgtccaacccctccatt
atcttcatggatgaacctacatcaggtttggatgcaagagcagctgcagtagtcatgcga
gcggtgaagaatgtggttgatactggcagaacaattgtttgcactatccaccaaccgagt
atcgatatatttgaagcatttgatgagttgattctattgaaaactggtggacatctgatc
tactgtggaccactgggtcagcattcaagtagggttatcgagtattttgagggtattcct
ggggttccaaagatcagaaataactacaatccagcaacatggatgctagaggtgacctct
acatctgcagaagctgaacttggcgtagattttgctcaaatttacaaggattctgctcta
tatgagaacaacaaagagcttgtaaagcaattgagcattccacctcatggttcagaagac
ctgcatttcccaacccgctttgcacgaaatggttggagtcaattcaaatcttgcttatgg
aagcagcacttgtcttattggagaagtccctcatacaatataacacgtaccatgcatatg
cttgtcgcatctttgctctttgggatactgttttggaagcaaggaaaagaactgaataac
cagcagggtgtgttcaatgtacttggttcaatgtacgttgctgtgatcttcttgggcata
aataactgttcgacggtattaccacatgtcacaaacgagcgaactgttctttaccgtgaa
aaatttgcagggatgtactcttcatgggcttactcacttgctcaggtgacaattgaaatt
ccctacctatttatccagacacttatatatgtgatcatcacatatccaatgataggatac
tactcgtcggtttataagattttctggtacttctatgccatgttctgcacattgctgtac
ttcaattatctgggaatgctgcttgtggcaatgacaccaagctttcctgtagcttcaatc
ctatcctctgccttctacacaattttcaatctgtttgcggggtttctgattcctcaaccg
caagttcctaaatggtggctttggttgttttatctgactcctacatcttggtcaataacc
ggtatgcttacttcacagtatggagacatccacaaggacattctggtatttggagagact
aaaacagtggctaccttcttggaagactactacggatttcaccatgatcgcttggctgtt
gtggctgttattcttatcgcctttcccctcgcttttgcttttctttttacatactgtata
caaagactgaacttccagaggaggtaa
DBGET
integrated database retrieval system
