Vitis riparia (riverbank grape): 117930153
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Entry
117930153 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: protein HASTY 1
KO
K14289
exportin-5
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117930153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vri03016
]
117930153
03036 Chromosome and associated proteins [BR:
vri03036
]
117930153
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117930153
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
117930153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
117930153
NCBI-ProteinID:
XP_034706528
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All DBs
Position
14:22409191..22453399
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AA seq
1206 aa
AA seq
DB search
MEENSTASNVARAIVAALDWSSSPDARKAAVSYLESIKAGDIRVLASTSFLLVKKDWSSE
IRLHAFKMLQHLVRLRWEELNSTERRNFANLAVDLMSEIANPCEEWALKSQTAALVAEIV
RREGLSLWQELLPSLVSLSNNGPIQAELVAMMLRWLPEDITVHNEDLEGDRRRLLLRGLT
QSLSEILPMLYTFLERHFGAALNEVGRQQLDAAKQHAATVTATLNAVNAYAEWAPLSDLA
KYGIIHGCGFLLSSPDFRLHACEFFKLVSSRKRPVDSSSSEFDSAMSNIFQILMNVSRDF
LYKSTSSGVVIDESEFEFAEYICESMVSLGSSNLQCITGDSTILSHYLQQMLGYFQHVKL
TLHYQSLPFWLALMRDLVSKPKIVAPAAGDGSVDNNPGSGSGQVDNEKRKLQSFVNDDIC
GTMLDVCFQRLLKREKVLPGTSFSLGPLELWSDDFEGKGEFSQYRSRLLELARFVASDKP
LIAAIKVSERIATIIKSLLLSPMSAQDIAVMESMPMALENIASVIFDGSNEYLGGSSETQ
LALCRIFEGLLQQLLCLKWTEPALVEVLGHYLDALGLFLKYFPEGVGSVINKLFELLTSL
PFVVKDPKTSSARYARLQICTSFVRLAKSAEKSLLPHMKGIADTMDYLQREGCLLRAEHN
ILGEAFLVMASVAGVQQQQEVLAWLLEPLSKQWIQVEWQQTYLSDPTGLIRLCSETSFMW
SIFHTVTFFERALKRSGIRKGSLNSQNSSTASSTPLHPMSSHLSWMLPPLLKLLRAIHSL
WSPPVSQSLPGEIKAAMIMSEVEQTSLLGEVNPKLSKSVAGFIDGSQIDTNKEYAESHET
DIRNWLKGIRDSGYNVLGLSTTIGDSFFKCLDISSLAIALMENIQSMEFRHIRQLIHSVL
IPLVKFCPSDLWEEWLEKLLHPLFIHSQQALSCSWSCLLREGRARVPDVHAILAGSDLKV
EVMEEKLLRDLTREICALLSVLASPGLNTGLPSLEQSGHVSRGDMSXLKDLDAFASTSMV
GFLLKHKGLALPLSQISLEAFTWTDGEAVTKVSSFCGVVVLLAISSSNVELREFVAKDLF
YAIIQGLALESNAFVSADLVGLCREIFVYLSDRDPSPRQVLLSLPCITPYDLLAFEEALA
KTSSPKEQKQHMKSLLLLATGNKLKALAAQKSMNVITNVSTRPRSMVNASEPRIEEGDSV
GLAAIL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaatagcacagcaagtaatgtggctcgagccattgtggctgcccttgactgg
agctcctcccccgatgccagaaaagccgctgtttcttacttagaatctataaaagcaggg
gatatacgtgtcttggcaagtacttccttccttttagtcaagaaggattggtcttctgag
attcggttacatgcgttcaaaatgttacagcatttggttcggttgcgatgggaggaatta
aactccactgaaagaagaaactttgcaaatcttgctgttgatttgatgtcagagattgca
aatccttgtgaagagtgggctttaaaaagtcagacagctgctcttgttgctgagatagtt
aggagagaaggccttagtctttggcaagagctgctaccatccctagtttccctatccaac
aatggtcctatacaagctgagttggttgcaatgatgctaaggtggcttcctgaagatatc
acagttcataatgaagatttagaaggtgataggcgaaggctattgttgcgtgggcttacc
cagtctttgtctgaaattttgccaatgttgtatactttcctagaaagacactttggagcg
gcattgaatgaagtgggtaggcaacaattggatgctgcaaaacagcatgctgcaacagtc
acagctactttaaatgctgttaatgcatatgctgaatgggctcctttatctgatcttgca
aaatatggcattattcatgggtgtggtttcttactttcttctcctgacttccgtcttcat
gcctgtgagtttttcaaacttgtctcttcaaggaagagacctgttgattcctcttcttct
gaatttgattctgcaatgagtaatatctttcagatcctgatgaatgtctctagagatttc
ttatataagtctacttccagtggtgtggttattgatgaaagtgaatttgagtttgcggaa
tatatatgtgagagtatggtgtctctaggttcttcgaacttgcaatgtatcactggggac
agcactattctttctcattatcttcaacagatgctgggatacttccaacatgttaagctg
acacttcattaccaatcgctgcccttttggctggcattaatgagagatttagtgtccaag
ccaaagattgttgcacctgcagctggagatggttcagttgataataatccaggctctggt
tctggacaggttgataatgaaaagagaaagcttcaaagttttgttaatgatgatatttgc
ggtactatgttggatgtatgtttccaacgcctgctcaaaagagagaaggttcttcctgga
acatcattttctctagggccattggagttgtggagtgatgattttgagggcaaaggagag
ttcagccagtatcgctctaggctgttggagctggcccgctttgttgcttcagataaaccc
cttatagctgctataaaggtttctgagagaattgccacaatcattaagagtctcttgctt
tcaccgatgtctgctcaggacattgctgtgatggaaagcatgccaatggcgttagagaat
attgcaagtgtgatttttgatggatctaatgaatatcttgggggtagttctgaaactcaa
cttgcgctttgcagaatatttgaaggtttgcttcagcaacttctttgtttgaaatggact
gaaccggcacttgtggaagtactcgggcactatttagatgcattgggtctcttcctgaaa
tattttccagaaggagttggaagtgtcatcaataaactgtttgagcttctgacttcactt
ccttttgttgttaaggatcctaaaacaagtagtgcccgttatgcaaggttgcagatctgt
acatcatttgttcggcttgccaaatcggctgaaaaaagtctcctgcctcacatgaagggg
atagctgacaccatggattatctgcaaagagaaggctgtttgcttcgtgcggagcataat
attcttggtgaagcgtttcttgtcatggcttctgttgctggggttcaacagcagcaagaa
gttttggcgtggttacttgaacctttgagcaaacagtggatacaggtagaatggcaacaa
acttatttatctgacccaacaggtcttattcgcctgtgttctgagacatcatttatgtgg
tcaattttccacactgtgacattctttgagagggcacttaagaggagtgggattagaaaa
ggcagtttgaattcacagaacagttcaacagcaagttctactcctttgcatccgatgtct
tctcatctctcatggatgctacctcctcttctgaagctgcttcgtgctatacattctctt
tggtctcctcctgtaagtcaatcattacctggggagataaaagctgcaatgatcatgagt
gaggttgaacaaactagtcttcttggggaagtgaaccctaaattgtcaaagagtgtagca
ggttttattgatggatctcagattgacacgaataaggagtatgcagaatcacatgaaact
gacatacgaaattggttgaaaggcatcagagatagtgggtataatgtattgggcttgtca
acgaccattggtgattccttcttcaaatgcttggatattagttctcttgctatagcgcta
atggagaatatacaatcaatggagttcaggcatataaggcagctcatccattcagttttg
attcctttggttaaattttgcccttcggatttgtgggaggagtggctggaaaagctcctt
catccattatttattcattctcagcaagctcttagctgctcatggtcttgtcttctacgt
gaagggagagccagggttccagatgtacatgccatacttgctggatcagacttaaaagtg
gaagtaatggaggaaaagctacttcgtgatttaactcgtgagatatgtgcacttctctca
gttttagcttcaccaggactgaatactgggcttccttctttagaacagtctgggcatgtc
agccgtggggacatgtctntcctcaaggatttggatgcatttgcatcaacctctatggtt
ggtttccttttgaagcataagggtctggctcttccactatcgcagataagtttagaagct
tttacatggacggatggtgaagctgtgactaaagtttcttccttttgtggagttgtggtt
cttctagctatttcaagttccaatgtagaacttcgggaatttgttgctaaagatttattt
tatgcaattatccaaggtttggcccttgagtcaaatgcttttgtcagtgccgatttggtt
ggtctctgtcgtgagatctttgtgtatctttcggatagagacccatctccacggcaggtt
ttgctgtctctcccttgcattacaccctatgatttgcttgcttttgaagaagctttggca
aagacatctagccctaaggagcaaaaacagcatatgaaaagcttgcttctattagccaca
ggaaacaagttaaaagcacttgctgctcagaaaagcatgaatgtgattacaaatgtttca
acaaggcctcgcagtatggttaatgcttcagaacccaggattgaagaaggggattctgtg
ggattagcagccattttgtaa
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