Vitis riparia (riverbank grape): 117930388
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Entry
117930388 CDS
T07274
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117930388
Spliceosome [BR:
vri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117930388
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
117930388
NCBI-ProteinID:
XP_034706913
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All DBs
Position
14:622665..635654
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AA seq
459 aa
AA seq
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MSTSGQPQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVE
FLDLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLFGNIIMCVILLSKVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSAR
NALDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIA
QPALGPDGKKKEPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGMQALI
QYPDVTTAAVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAV
QQAPGHPGATTVWQNPQAAPLYTGHDAAAVQVPSWDPNMQAGRSTFASAASAFPSQPFAS
SSISAYPAPPGSSPLTPAVPPNVRPGGASPPGRPPYFGQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctcggggcagccgcagttccgatacactcagaccccgtcgaaggtcctccac
cttcgcaatcttccatgggagtgcaccgaggaggagcttgtggagctctgtaaacccttc
ggcaagatcgtcaacaccaagtgcaatgtcggcgccaatcgcaaccaggccttcgtggaa
ttcttggaccttaatcaggccatttctatggtttcatattatgcttcatcttcggaacct
gcacaggttcgtggtaagactgtgtatatccaatactcgaacagacatgaaattgtcaat
aacaagagtccgggagatgttcctggaaatgtcttgctggtaacaattgagggtgtagaa
gctggcgatgtgagcatagatgttattcacttgtttggaaatattatcatgtgcgtcata
ctcctttctaaggtgttctctgcttttggatttgtgcacaaaattgctacatttgaaaag
gctgcaggtttccaggccttaatccaattcaccgacgctgagactgcttcttcagcaagg
aatgcattggatggaagaagtattcccaggtatttactgccagaacatgttggttcatgt
cacttgcgtatctcatattctgcacacacagatctgaatatcaagttccagtctcatcga
agcagggactacacaaatccataccttcctgtgaatcctactgcaattgagggaatagca
cagcctgctttaggtccggatggcaagaaaaaagaacctgagagtaatgttcttcttgct
tcaattgagaatatgcaatatgctgttacagtagatgttcttcacacggtattctctgca
tttggtactgtccagaaaattgccatatttgagaaaaatggtgggatgcaggctctaatt
caatatcctgatgtcacaactgcagcagttgccaaagaagctctagagggacactgcata
tatgatggtggctattgtaagcttcatctatcatactctcgtcatactgatctcaatgta
aaggcacatagtgatagaagtagagattatacaatcccagattcaggtctgcttgcagtg
caacaagcacctggtcacccaggtgctacaactgtatggcagaatcctcaggctgctcca
ttgtatactgggcatgatgccgctgctgtgcaagtgccatcatgggacccgaacatgcag
gcaggtagatcaacctttgcttcagctgctagcgcatttcccagtcaaccatttgcatca
tcttctatttctgcttatccggctccccctggttcatcacccttgacaccagctgttccg
ccgaatgtgcgacctggtggtgcttcacctccaggccgtcctccttattttggtcagtaa
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