Vitis riparia (riverbank grape): 117930693
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Entry
117930693 CDS
T07274
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117930693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117930693
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117930693
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
LRR_8
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
117930693
NCBI-ProteinID:
XP_034707225
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Position
14:complement(22513531..22518844)
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AA seq
581 aa
AA seq
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MGYSFPEEVLEHVLSFIDSDSDRNSVSLVCKSWHDIERWCRRRLFVGNCYAVSPAIAIRR
FPELRSVSLKGKPHFADFNLVPHEWGGYAYPWIAAFAKAYPWLEELRLKRMVVSDEALEL
IAKKFKNFRVLVMYSCEGFSTDGLATIAANCRNLKELDLSESEVDDVSGNWLSQFPDSYT
SLESLNITSLSSEIRFSALERLVGRCPNLKTLKLSHSVPLDLLPNLLQKAPQLVELGSGL
HTKEVHPDLYSKLAGAFSGCKGLKRLCGLQDVVPSYLPTLYPICVGLTSLNLSDAPIQCP
ELIKLVSQCQNLQRLWVLDYIEDTGLNALAESCKDLRELRVFPSDPFGQEPNVSLTEQGL
VSVSAGCPKLHSVLYFCRRMSNVALSTIARNRPNLTHFRLCIIERFRPDYITLEPLDVGF
GAIVEHCKDLKRLSLSGLLTDRVFEYIGSHGKKLEMLSLAFAGDSDLGLHHVLSGCKSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSACQVSYRACKLLGQKMPRLNVEVIAEQGHP
DSSPDEYPVEKLYIYRTVSGPRSDMPSFVWTMDKNSALSSS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggggtattcgtttcctgaggaggttctagagcatgtgctctcgtttatagactcggac
tcggaccggaactcggtctcattggtgtgcaaatcatggcacgacatcgagaggtggtgc
cgccggcgactatttgttgggaactgctatgccgtgagccctgcgatcgcgatccgtcgc
tttccggagctccgatctgtgtccttgaaaggtaagccccacttcgcggatttcaatctg
gttccgcacgagtggggcggttatgcgtacccatggattgctgcgttcgcgaaggcgtac
ccgtggttggaggagctgaggctgaagaggatggtggtgagtgacgaggcgttggagttg
attgcgaagaagtttaagaattttagggttttggttatgtactcctgtgaaggcttctcc
actgatgggttggcgacgattgcagctaactgcaggaacctgaaagagctggacttgtca
gaaagtgaagtagatgatgtgagtgggaattggctgagccagtttcctgattcttataca
tccctggagtcacttaatattacttcactaagctcggagattagattctctgccctggag
cgcctggttggtaggtgcccaaatctgaaaactctcaagttgagccattcagtgcccctt
gacctgctacccaacctcctccagaaggcccctcagctagttgagctgggttcaggcttg
cacacgaaggaagtccatcctgatctatattcaaagcttgcaggagctttttcaggctgc
aaggggcttaagagactatgtggtttacaggatgtggtcccttcctaccttccaactctc
tacccaatttgcgttggacttacatccctgaacttaagtgatgcacccatccaatgccca
gaactcatcaagctggtgagccagtgccagaatctgcagcgcctgtgggtactggattat
attgaagacactggtcttaatgcccttgcagaatcttgcaaggacctgcgagaattgagg
gtatttccttctgatccatttggtcaggaaccaaatgtctctttaacggaacaaggcctt
gtatcagtttctgcaggttgccccaagcttcactcggttctatatttttgtcgtcggatg
tccaatgtggccctatctactattgctaggaaccgtcccaaccttactcactttcgtcta
tgcatcattgaacgcttccgtcccgactatattaccctagaaccactggatgtgggcttt
ggggccattgttgagcactgcaaggatctcaagcgcctttcactttctggtctcctcact
gatcgtgtatttgagtacatagggtcccatggcaaaaagcttgagatgctttccctagct
tttgctggggacagtgatttgggtctccaccatgttttgtcaggatgtaagagcctccgt
aaactggagattagagattgcccttttggtgacaaagcacttttggcaaatgcagcaaag
ctggagacaatgcgatccctttggatgtctgcatgtcaagtgagttacagagcttgtaaa
ctgctaggccagaagatgccaaggttgaatgttgaggtcattgctgagcaaggacatcct
gattcgagccctgatgaataccctgttgagaagctttatatttataggactgtttcagga
ccccgatcagacatgccatcttttgtttggacaatggataagaactcagccttaagctct
tcttga
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